RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 MLXQ9UH92 298 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 GMEB2Q9UKD1 530 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SF3B6Q9Y3B4 125 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 CSNK1G3Q9Y6M4 447 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SLC22A23A1A5C7 686 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 M0QZQ0 153 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 STK25O00506 426 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 FRS3O43559 492 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 LPLP06858 475 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 NR2F1P10589 423 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 HMGA2P52926 109 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 OCLNQ16625 522 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 GGTA1PQ4G0N0 100 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SPIN4Q56A73 249 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SPRYD7Q5W111 196 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 AGTRAPQ6RW13 159 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 CD300LGQ6UXG3 332 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 KRT78Q8N1N4 520 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF671Q8TAW3 534 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SEC22CQ9BRL7 303 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SCPEP1Q9HB40 452 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 LYARQ9NX58 379 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 ACSL5Q9ULC5 683 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 EXOSC1Q9Y3B2 195 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 KIAA0100Q14667 2235 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 A0A1B0GVM2 712 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 PRODHO43272 600 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 IL3P08700 152 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 OPRD1P41143 372 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 SLC6A11P48066 632 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 TAP2Q03519 686 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 TLE2Q04725 743 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 IGSF11Q5DX21 431 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 ZER1Q7Z7L7 766 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 OR2T4Q8NH00 348 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 BBS10Q8TAM1 723 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ASB11Q8WXH4 323 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 RALGAPA2Q2PPJ7 1873 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 PIP5K1CO60331 668 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ARAFP10398 606 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 F8A1P23610 371 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 HOXD10P28358 340 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ACVR1BP36896 505 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 LIMS1P48059 325 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 VEGFCP49767 419 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 DSG2Q14126 1118 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 FAM26EQ8N5C1 309 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 HSD17B8Q92506 261 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 EXOSC8Q96B26 276 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 ARHGAP9Q9BRR9 750 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 POLDIP3Q9BY77 421 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 ARL6Q9H0F7 186 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 ISG20L2Q9H9L3 353 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 KCMF1Q9P0J7 381 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 KCNMB2Q9Y691 235 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 DOCK4Q8N1I0 1966 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 MYO9BQ13459 2157 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 A0A1B0GVI7 797 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 MTMR11A4FU01 709 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 FZD7O75084 574 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 C4BPBP20851 252 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 PAICSP22234 425 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 ERVK-25P63136 954 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 RAB40BQ12829 278 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 GPR17Q13304 367 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 LIPJQ5W064 366 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 SLC27A4Q6P1M0 643 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 LINGO2Q7L985 606 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 LRRC28Q86X40 367 aaPredicted RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 BBS1Q8NFJ9 593 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 GPR32P1Q8NGA4 272 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 OR5M3Q8NGP4 307 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 C12orf57Q99622 126 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 GPA33Q99795 319 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
VDR-208ENST00000550325 GINS4Q9BRT9 223 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 FANCFQ9NPI8 374 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ZSCAN32Q9NX65 697 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ZDHHC3Q9NYG2 299 aa11.42□□□□□ -0.58
VDR-208ENST00000550325 ZC3H12DA2A288 527 aaKnown RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 NPIPB15A6NHN6 443 aaPredicted RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 RTCAO00442 366 aaKnown RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 SEMA7AO75326 666 aa11.41□□□□□ -0.58
VDR-208ENST00000550325 SPDEFO95238 335 aa11.41□□□□□ -0.58
VDR-208ENST00000550325 CSKP41240 450 aa11.41□□□□□ -0.58
VDR-208ENST00000550325 SLC6A12P48065 614 aa11.41□□□□□ -0.58
VDR-208ENST00000550325 COL9A2Q14055 689 aaPredicted RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 LILRA3Q8N6C8 439 aaPredicted RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 FBXO15Q8NCQ5 510 aaPredicted RBP11.41□□□□□ -0.58
VDR-208ENST00000550325 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
VDR-208ENST00000550325 OR5D16Q8NGK9 328 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms