RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C2orf92A0A1B0GVN3 265 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 MBD3L3A6NE82 208 aaPredicted RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 CD8B2A6NJW9 211 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 SMIM23A6NLE4 172 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 HAX1O00165 279 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 CASKO14936 926 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 PLIN3O60664 434 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 CDH16O75309 829 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 GLRA3O75311 464 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 GDF1P27539 372 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 TMED10P49755 219 aaKnown RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 HTR6P50406 440 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 CDK9P50750 372 aaKnown RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 SLC18A2Q05940 514 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 CCNYL2Q5T2Q4 361 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 FNDC7Q5VTL7 733 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 VASNQ6EMK4 673 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 OR52E8Q6IFG1 317 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 PAGE2Q7Z2X7 111 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 ZNF615Q8N8J6 731 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 OR2W6PQ8NHA6 318 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 MBD3L2Q8NHZ7 208 aaPredicted RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 METTL6Q8TCB7 284 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 SPPL2AQ8TCT8 520 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 IGFBPL1Q8WX77 278 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 DIO2Q92813 273 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 ADIPOR1Q96A54 375 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 TM4SF18Q96CE8 201 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 RBM24Q9BX46 236 aaKnown RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
DDX54-206ENST00000549271 VPS29Q9UBQ0 182 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
DDX54-206ENST00000549271 ROS1P08922 2347 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 C15orf38-AP3S2A0A0A6YYH1 394 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 DEFB108AA8MXU0 73 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 ULK1O75385 1050 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KRT6AP02538 564 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KRT6BP04259 564 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 CT62P0C5K7 136 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 MYL2P10916 166 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 HSD3B1P14060 373 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 NAGAP17050 411 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KRT15P19012 456 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 HSD3B2P26439 372 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 CCT5P48643 541 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KRT6CP48668 564 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 TRPC1P48995 793 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 XKP51811 444 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 MAPK12P53778 367 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 PKNOX1P55347 436 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 DNAJB13P59910 316 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 RAE1P78406 368 aaKnown RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 LCP2Q13094 533 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KRTAP24-1Q3LI83 254 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 TMEM81Q6P7N7 255 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 GALNT12Q8IXK2 581 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 C1orf52Q8N6N3 182 aaKnown RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 CCNYL1Q8N7R7 359 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 OR7G1Q8NGA0 311 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 OR4K14Q8NGD5 310 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 AENQ8WTP8 325 aaKnown RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 TMEM41AQ96HV5 264 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 JSRP1Q96MG2 331 aaPredicted RBP11.08□□□□□ -0.64
DDX54-206ENST00000549271 RILPQ96NA2 401 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 KCNA7Q96RP8 456 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 ACPTQ9BZG2 426 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 NMRK1Q9NWW6 199 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 GRID1Q9ULK0 1009 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 TIMM22Q9Y584 194 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 PCDHA9Q9Y5H5 950 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX54-206ENST00000549271 MED12LQ86YW9 2145 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 MEGF8Q7Z7M0 2845 aa11.08□□□□□ -0.64
DDX54-206ENST00000549271 SERTM1A2A2V5 107 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 CTIFO43310 598 aaKnown RBP11.07□□□□□ -0.64
DDX54-206ENST00000549271 TLX2O43763 284 aaPredicted RBP11.07□□□□□ -0.64
DDX54-206ENST00000549271 ESRRBO95718 433 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 ENO1P06733 434 aaKnown RBP11.07□□□□□ -0.64
DDX54-206ENST00000549271 NUDT17P0C025 328 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 KRT4P19013 534 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 S1PR1P21453 382 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 PIK3R1P27986 724 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 HMOX2P30519 316 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 SSTR4P31391 388 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 SOX18P35713 384 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 CASP3P42574 277 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 NAGLUP54802 743 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 FOXA1P55317 472 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 NRG3P56975 720 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 FBXW4P57775 412 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 MGAT2Q10469 447 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 CSTF3Q12996 717 aaKnown RBP11.07□□□□□ -0.64
DDX54-206ENST00000549271 TNK1Q13470 666 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms