RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CCL3P10147 92 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 EFNA1P20827 205 aaPredicted RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 PRIM2P49643 509 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 POLR2JP52435 117 aaKnown RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 NME5P56597 212 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 CORO7P57737 925 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 STX1BP61266 288 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 MRPS22P82650 360 aaKnown RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 PLCXD2Q0VAA5 305 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 SNTA1Q13424 505 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 GAB1Q13480 694 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 HYAL4Q2M3T9 481 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 MFSD12Q6NUT3 480 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 GALNT11Q8NCW6 608 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 OR10G3Q8NGC4 313 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 GRHL3Q8TE85 626 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 DIO2Q92813 273 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 HGDQ93099 445 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 OMA1Q96E52 524 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 FRMD6Q96NE9 622 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 STACQ99469 402 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 SLX1AQ9BQ83 275 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 ANGPTL4Q9BY76 406 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 DUSP22Q9NRW4 184 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 DEPPQ9NTK1 212 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 MRGBPQ9NV56 204 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 GPATCH2Q9NW75 528 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 DCTN4Q9UJW0 460 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 CNOT11Q9UKZ1 510 aaKnown RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 CBLCQ9ULV8 474 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 A0A0G2JND7 137 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 SNX4O95219 450 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PLA2G2AP14555 144 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 UQCRC2P22695 453 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 LCN1P31025 176 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PIGAP37287 484 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 DGKQP52824 942 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PRKAG1P54619 331 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PSMD4P55036 377 aaKnown RBP13.3□□□□□ -0.28
DDX54-203ENST00000546869 FBXW4P57775 412 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 EFR3AQ14156 821 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 SQLEQ14534 574 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 DECR1Q16698 335 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 CGB2Q6NT52 195 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PAOXQ6QHF9 649 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 BLOC1S3Q6QNY0 202 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 GK5Q6ZS86 529 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 CLECL1Q8IZS7 167 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
DDX54-203ENST00000546869 FAM13CQ8NE31 585 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 OR4A15Q8NGL6 344 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 FAM110BQ8TC76 370 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 MIPOL1Q8TD10 442 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 RNF138Q8WVD3 245 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 NR4A3Q92570 626 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 TMBIM1Q969X1 311 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 MARK4Q96L34 752 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 COL21A1Q96P44 957 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 ACTRT3Q9BYD9 372 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PIGUQ9H490 435 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PROK2Q9HC23 129 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 OLAHQ9NV23 265 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 KLHL14Q9P2G3 628 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 PCDHGB3Q9Y5G1 929 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 SNX8Q9Y5X2 465 aa13.3□□□□□ -0.28
DDX54-203ENST00000546869 NME6O75414 186 aaPredicted RBP13.29□□□□□ -0.28
DDX54-203ENST00000546869 REM1O75628 298 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 KCNH1O95259 989 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 IL33O95760 270 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 ALOX5P09917 674 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 ZCCHC18P0CG32 403 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 EDN3P14138 238 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 GABRA3P34903 492 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 KRT20P35900 424 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 CASP3P42574 277 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 MAGEA8P43361 318 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 MAN2A2P49641 1150 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 MEOX1P50221 254 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 ARFIP2P53365 341 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 TXNL4AP83876 142 aaKnown RBP13.29□□□□□ -0.28
DDX54-203ENST00000546869 FOXO1Q12778 655 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 RCAN2Q14206 197 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 NNATQ16517 81 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 SPDYE7PQ495Y7 208 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 KRTCAP3Q53RY4 240 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
DDX54-203ENST00000546869 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 SLC30A6Q6NXT4 461 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 CDC73Q6P1J9 531 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 C6orf120Q7Z4R8 191 aa13.29□□□□□ -0.28
DDX54-203ENST00000546869 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms