RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZFAND2BQ8WV99 257 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 KAT2AQ92830 837 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 ZNF669Q96BR6 464 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 DNAJC11Q9NVH1 559 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 DKKL1Q9UK85 242 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 FBXO5Q9UKT4 447 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 SPACA6W5XKT8 324 aa13.72□□□□□ -0.21
CLSTN3-216ENST00000545663 UQCRHLA0A096LP55 91 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 MAGEB16A2A368 324 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 PRAMEF25A6NGN4 478 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 VWC2LB2RUY7 222 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 UGT2B11O75310 529 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 FESP07332 822 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 PEPDP12955 493 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 APEHP13798 732 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 GNAZP19086 355 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 TGM3Q08188 693 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 SLAMF1Q13291 335 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 SNTA1Q13424 505 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 AGAP6Q5VW22 663 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 TMEM81Q6P7N7 255 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 NUP54Q7Z3B4 507 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 OR6K3Q8NGY3 331 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 TANKQ92844 425 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 TBCDQ9BTW9 1192 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 BHLHE41Q9C0J9 482 aaPredicted RBP13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 NT5DC2Q9H857 520 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.21
CLSTN3-216ENST00000545663 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 RAD51CO43502 376 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 WDR47O94967 919 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 GPR75O95800 540 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 ADH6P28332 368 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 CDH11P55287 796 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 IL2P60568 153 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 HMGCS1Q01581 520 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 PPP1R3AQ16821 1122 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 RNASEH2BQ5TBB1 312 aaKnown RBP13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 TREML4Q6UXN2 200 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 PDIK1LQ8N165 341 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 KRT78Q8N1N4 520 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 PIWIL2Q8TC59 973 aaKnown RBP13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 OMA1Q96E52 524 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 VPS39Q96JC1 886 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 NAT9Q9BTE0 207 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 OR10A5Q9H207 317 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 OR10A4Q9H209 315 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 CXorf21Q9HAI6 301 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 TAS2R13Q9NYV9 303 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 PCDHGB1Q9Y5G3 927 aa13.7□□□□□ -0.22
CLSTN3-216ENST00000545663 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 PYGBP11216 843 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 GPX3P22352 226 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 GSTM2P28161 218 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 GABRB3P28472 473 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 HPDP32754 393 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 BIKQ13323 160 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 AP5B1Q2VPB7 878 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 BEND4Q6ZU67 534 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 NAT8LQ8N9F0 302 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 C7orf57Q8NEG2 295 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 STEAP2Q8NFT2 490 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 LRRC39Q96DD0 335 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 ROGDIQ9GZN7 287 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 C12orf49Q9H741 205 aa13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 TMEFF2Q9UIK5 374 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 MRPS18CQ9Y3D5 142 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-216ENST00000545663 SDR42E2A6NKP2 422 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 E7EQL1 145 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 SCELO95171 688 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 PLGP00747 810 aaPredicted RBP13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 NAGAP17050 411 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 CD22P20273 847 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 IL11P20809 199 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 IVDP26440 423 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 TTKP33981 857 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 SSR2P43308 183 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 NR4A2P43354 598 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 HNRNPH2P55795 449 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 CTBP2P56545 445 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 EEFSECP57772 596 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 TNFRSF17Q02223 184 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 HSP90AA5PQ58FG0 334 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 GPR180Q86V85 440 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 MS4A8Q9BY19 250 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-216ENST00000545663 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms