RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 OR7G2Q8NG99 324 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 OR6Y1Q8NGX8 325 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 CEP70Q8NHQ1 597 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 NEIL3Q8TAT5 605 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 ASB5Q8WWX0 329 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 SLC35A4Q96G79 324 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 PKNOX2Q96KN3 472 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 VSTM2LQ96N03 204 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 AMDHD1Q96NU7 426 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 DMRTA2Q96SC8 542 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 PRPF18Q99633 342 aaKnown RBP10.83□□□□□ -0.68
HDAC4-216ENST00000544989 OSBPL11Q9BXB4 747 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 TUBB1Q9H4B7 451 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 GLIPR2Q9H4G4 154 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 FOLH1BQ9HBA9 442 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 C3orf14Q9HBI5 128 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 PROK2Q9HC23 129 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 ACSS1Q9NUB1 689 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-216ENST00000544989 ATAD3AQ9NVI7 634 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 KLRF1Q9NZS2 232 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 OR10H1Q9Y4A9 318 aa10.83□□□□□ -0.68
HDAC4-216ENST00000544989 PRAMEF25A6NGN4 478 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 LRRC3CA6NJW4 275 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PRSS44E7EML9 344 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 NPIPA2E9PIF3 369 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 NPIPA3F8WFD2 350 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 REM1O75628 298 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 SOX30O94993 753 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 CLDN14O95500 239 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 CT45A8P0DMV1 189 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 CT45A9P0DMV2 189 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 CREB1P16220 341 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 SDC1P18827 310 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 ACVR2AP27037 513 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 GPC1P35052 558 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 SOX18P35713 384 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PNLIPRP2P54317 469 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 MANFP55145 182 aaKnown RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 ZNF155Q12901 538 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PDE7AQ13946 482 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 NNATQ16517 81 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 DECR1Q16698 335 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 ZNF630Q2M218 657 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 GXYLT1Q4G148 440 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 RFTN2Q52LD8 501 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 CT45A2Q5DJT8 189 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 XKR7Q5GH72 579 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 TIGD3Q6B0B8 471 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 TMEM107Q6UX40 140 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 TMEM64Q6YI46 380 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 LARP4Q71RC2 724 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 SLC44A2Q8IWA5 706 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PM20D2Q8IYS1 436 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PRR22Q8IZ63 422 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 OR1J4Q8NGS1 313 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 OR2T11Q8NH01 316 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 RND1Q92730 232 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 HGDQ93099 445 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 TMBIM1Q969X1 311 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 ELP4Q96EB1 424 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 Q9N2J8 555 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 KCNK9Q9NPC2 374 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 SH3BP4Q9P0V3 963 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 EIF3LQ9Y262 564 aaKnown RBP10.82□□□□□ -0.68
HDAC4-216ENST00000544989 C15orf41Q9Y2V0 281 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 PTGDR2Q9Y5Y4 395 aa10.82□□□□□ -0.68
HDAC4-216ENST00000544989 TACC2O95359 2948 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 TMEM233B4DJY2 109 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 UPK1AO00322 258 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ADAM10O14672 748 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 HNRNPRO43390 633 aaKnown RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 CBR3O75828 277 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 PSMG1O95456 288 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 HPNP05981 417 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 DHRS4L1P0CG22 281 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 BCKDHAP12694 445 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 PRPS1L1P21108 318 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 TACR1P25103 407 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 HTR1EP28566 365 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 DCTP40126 519 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 MC3RP41968 323 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 FRKP42685 505 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 CLK3P49761 638 aaKnown RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 CDK9P50750 372 aaKnown RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 SLC18A1P54219 525 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ABCE1P61221 599 aaKnown RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 MLC1Q15049 377 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 CHI3L2Q15782 390 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ZCCHC12Q6PEW1 402 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 LRRC34Q8IZ02 419 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 FNDC5Q8NAU1 212 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 CA5BP1Q8WTZ4 195 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 NTNG2Q96CW9 530 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 EGLN2Q96KS0 407 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 TSSK3Q96PN8 268 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 UBQLN3Q9H347 655 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ATP6V1HQ9UI12 483 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ZDHHC2Q9UIJ5 367 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 ABCG2Q9UNQ0 655 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms