RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SCO1O75880 301 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PTHP01270 115 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 GASTP01350 101 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 ACP5P13686 325 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 POU1F1P28069 291 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 GGT2P36268 569 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHFR-223ENST00000544268 PCDH1Q08174 1060 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 FZD5Q13467 585 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 UBXN2BQ14CS0 331 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 BTBD16Q32M84 506 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PRAMEF14Q5SWL7 426 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PRAMEF13Q5VWM6 474 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 METRNLQ641Q3 311 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 SYT13Q7L8C5 426 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 TRIM69Q86WT6 500 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 GOT1L1Q8NHS2 421 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 ASB12Q8WXK4 309 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 MYDGFQ969H8 173 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PRAP1Q96NZ9 151 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 CHCHD6Q9BRQ6 235 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 FOXQ1Q9C009 403 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 LIN7BQ9HAP6 207 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 LINC00862A6NCI5 91 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 FOXE1O00358 373 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 AKR7A2O43488 359 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 SOX14O95416 240 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 BCHEP06276 602 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 HSMCR30P0CW71 290 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 ICAM2P13598 275 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 HOXB3P14651 431 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 CSTF2P33240 577 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHFR-223ENST00000544268 ZNF33BQ06732 778 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 SCN1BQ07699 218 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 LRRC74AQ0VAA2 488 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 HYAL2Q12891 473 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 RPA4Q13156 261 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 ASAH1Q13510 395 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 BAK1Q16611 211 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 MICAQ29983 383 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 TOR1AIP1Q5JTV8 583 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 BCDIN3DQ7Z5W3 292 aaKnown RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 PDZD3Q86UT5 571 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 COMTD1Q86VU5 262 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 DNAJC22Q8N4W6 341 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 FBXO15Q8NCQ5 510 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 ASB15Q8WXK1 588 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 EFCAB11Q9BUY7 163 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PRRG3Q9BZD7 231 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 MIEF1Q9NQG6 463 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PSORS1C1Q9UIG5 152 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 PLEKHM1Q9Y4G2 1056 aa14.12□□□□□ -0.15
CHFR-223ENST00000544268 DNMT3AQ9Y6K1 912 aaPredicted RBP14.12□□□□□ -0.15
CHFR-223ENST00000544268 TRBV4-1A0A0J9YWV2 114 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 TRBC2A0A5B9 178 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 PCP4L1A6NKN8 68 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 B4DXG7 233 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CACNB4O00305 520 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 TRIM3O75382 744 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 SEMA4FO95754 770 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CCNYL3P0C7X3 344 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 ADORA3P0DMS8 318 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 ALPPL2P10696 532 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 TALDO1P37837 337 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 RGS6P49758 472 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 TEAD4Q15561 434 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CEACAM20Q6UY09 585 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 FAM129CQ86XR2 697 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 AQP11Q8NBQ7 271 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 ZNF675Q8TD23 568 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 UBASH3BQ8TF42 649 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 SPOCK3Q9BQ16 436 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 GTPBP2Q9BX10 602 aaKnown RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 RNF121Q9H920 327 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 FGF22Q9HCT0 170 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 MS4A12Q9NXJ0 267 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CYP8B1Q9UNU6 501 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CHURC1-FNTBB4DL54 471 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 KIAA0513O60268 411 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 CYP7B1O75881 506 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 PAHP00439 452 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 ATF4P18848 351 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 ZP2Q05996 745 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 SLC9B2Q86UD5 537 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 TTLQ8NG68 377 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 OR4M2Q8NGB6 313 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 OR4D11Q8NGI4 311 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 VANGL1Q8TAA9 524 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 TFGQ92734 400 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 EXOSC8Q96B26 276 aaKnown RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 WDR34Q96EX3 536 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 BMFQ96LC9 184 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 OSGEPL1Q9H4B0 414 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 XKR8Q9H6D3 395 aa14.11□□□□□ -0.15
CHFR-223ENST00000544268 C6orf106Q9H6K1 298 aaPredicted RBP14.11□□□□□ -0.15
CHFR-223ENST00000544268 MYNNQ9NPC7 610 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms