RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MAD2L1BPQ15013 274 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 ZC3H12BQ5HYM0 836 aaKnown RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 FHL5Q5TD97 284 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 BCDIN3DQ7Z5W3 292 aaKnown RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 RBM12BQ8IXT5 1001 aaKnown RBP13.18□□□□□ -0.3
ACTN1-205ENST00000538545 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 GPR151Q8TDV0 419 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 MAN2C1Q9NTJ4 1040 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 KCND3Q9UK17 655 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
ACTN1-205ENST00000538545 IGHV1OR21-1A0A087WYE8 117 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 LGI1O95970 557 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 H1F0P07305 194 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 PRG2P13727 222 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 OCA2Q04671 838 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CDC73Q6P1J9 531 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 PODNL1Q6PEZ8 512 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 KLHL35Q6PF15 583 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CCDC81Q6ZN84 652 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF614Q8N883 585 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 RCBTB1Q8NDN9 531 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 BBS10Q8TAM1 723 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 HDAC2Q92769 488 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 TCTN2Q96GX1 697 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 LHPPQ9H008 270 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 HEATR5AQ86XA9 2040 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 LILRA5A6NI73 299 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 A8MUA0 341 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 TMEM150CB9EJG8 249 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 INMTO95050 263 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CBX7O95931 251 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ALPPP05187 535 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CBLP22681 906 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 GABRA3P34903 492 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 RAB38P57729 211 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 TUBA4AP68366 448 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 DCST1Q5T197 706 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 OGFOD3Q6PK18 319 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF773Q6PK81 442 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SLC30A8Q8IWU4 369 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 PIGKQ92643 395 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SDF2Q99470 211 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 DCUN1D5Q9BTE7 237 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CNPPD1Q9BV87 410 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CXorf21Q9HAI6 301 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CPED1A4D0V7 1026 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ATP1B1P05026 303 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 FOLR1P15328 257 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CHMP24386 653 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 RYKP34925 604 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 HMGA2P52926 109 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 HPCAP84074 193 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 C1orf189Q5VU69 101 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SYNDIG1Q9H7V2 258 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 BCL2L10Q9HD36 194 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-205ENST00000538545 CLDN16Q9Y5I7 305 aa13.17□□□□□ -0.3
ACTN1-205ENST00000538545 SYNDIG1LA6NDD5 238 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 TRIM64CA6NLI5 447 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 UGT2B17O75795 530 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 HOXB6P17509 224 aaKnown RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 STX4Q12846 297 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF267Q14586 743 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 MFSD4BQ5TF39 518 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF321PQ8N8H1 164 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF540Q8NDQ6 660 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 FAM174AQ8TBP5 190 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 MPP4Q96JB8 637 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 LMF1Q96S06 567 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 MESP1Q9BRJ9 268 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 FNDC11Q9BVV2 318 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 SMOC1Q9H4F8 434 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 SEMA4GQ9NTN9 838 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 TLCD2A6NGC4 264 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms