RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 FABP12A6NFH5 140 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 OR52A4PA6NMU1 304 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SLC30A4O14863 429 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 CERS1P27544 350 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 IFNGR2P38484 337 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 HTRA3P83110 453 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SCN1BQ07699 218 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 TSPAN31Q12999 210 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 TPBGQ13641 420 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 ZNF730Q6ZMV8 503 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 FBXL6Q8N531 539 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 OR52E1Q8NGJ3 308 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 UFD1Q92890 307 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SLC38A2Q96QD8 506 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 ARHGDIGQ99819 225 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 CHD7Q9P2D1 2997 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 SERGEFQ9UGK8 458 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 N6AMT1Q9Y5N5 214 aa13.45□□□□□ -0.26
USP44-203ENST00000537435 TRPM6Q9BX84 2022 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 SYT5O00445 386 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 ALPPP05187 535 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 F3P13726 295 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CSNK2A2P19784 350 aaPredicted RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 CD79BP40259 229 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 MC3RP41968 323 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 RAB8AP61006 207 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 PRR5P85299 388 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 FGL2Q14314 439 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 TRAM2Q15035 370 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 DDI2Q5TDH0 399 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 TYW3Q6IPR3 259 aaKnown RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 SLC48A1Q6P1K1 146 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 XKRXQ6PP77 449 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 GATAD2AQ86YP4 633 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CAMKK1Q8N5S9 505 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 ZFP41Q8N8Y5 198 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 NUP43Q8NFH3 380 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 MOAP1Q96BY2 351 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 MMP28Q9H239 520 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CES1P1Q9UKY3 287 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 GPR89AB7ZAQ6 455 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 TFECO14948 347 aaPredicted RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 EMC8O43402 210 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 IDH3BO43837 385 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 TMCC2O75069 709 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CH25HO95992 272 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CSF3P09919 207 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 GPR89BP0CG08 455 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 LIMS3P0CW19 117 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 LIMS4P0CW20 117 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 TRIM23P36406 574 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 MADCAM1Q13477 382 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 DUSP6Q16828 381 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 PRAMEF8Q5VWM4 474 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 PRAMEF7Q5VXH5 474 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 QSOX2Q6ZRP7 698 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 RASSF6Q6ZTQ3 369 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 RRM2BQ7LG56 351 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 OR9A2Q8NGT5 310 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 DIO2Q92813 273 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 MED18Q9BUE0 208 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 RAB11FIP5Q9BXF6 653 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 SYNPO2LQ9H987 977 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 ISYNA1Q9NPH2 558 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
USP44-203ENST00000537435 MOSPD1Q9UJG1 213 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 CHST2Q9Y4C5 530 aa13.44□□□□□ -0.26
USP44-203ENST00000537435 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
USP44-203ENST00000537435 TCEA1P23193 301 aaKnown RBP13.43□□□□□ -0.26
USP44-203ENST00000537435 OMPP47874 163 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 AVPR1BP47901 424 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 CAV3P56539 151 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 HOXC5Q00444 222 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 FABP5Q01469 135 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 TGM3Q08188 693 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 ST3GAL3Q11203 375 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 CST6Q15828 149 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 LHFPL3Q86UP9 236 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 TMEM145Q8NBT3 493 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 OR52P1PQ8NH57 321 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 PHOX2BQ99453 314 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 ARHGAP9Q9BRR9 750 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 PHPT1Q9NRX4 125 aaPredicted RBP13.43□□□□□ -0.26
USP44-203ENST00000537435 GSTK1Q9Y2Q3 226 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 GOLGA4Q13439 2230 aaKnown RBP13.43□□□□□ -0.26
USP44-203ENST00000537435 DENND4AQ7Z401 1863 aa13.43□□□□□ -0.26
USP44-203ENST00000537435 MEIOCA2RUB1 952 aa13.42□□□□□ -0.26
USP44-203ENST00000537435 A8MV72 311 aaPredicted RBP13.42□□□□□ -0.26
USP44-203ENST00000537435 SCAMP1O15126 338 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms