RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 LAMP1P11279 417 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 LBPP18428 481 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PRPS1L1P21108 318 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 DRD5P21918 477 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 GDF1P27539 372 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 SOAT1P35610 550 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 MAGEA5P43359 124 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PPICP45877 212 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC18A1P54219 525 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 NME5P56597 212 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 EMX2Q04743 252 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PDE7AQ13946 482 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 CEBPEQ15744 281 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 NTRK2Q16620 822 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 TMEM198Q66K66 360 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PAOXQ6QHF9 649 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 LYPD8Q6UX82 237 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 LARP4Q71RC2 724 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 SIAH3Q8IW03 269 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 OR52N2Q8NGI0 321 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 RAB3IL1Q8TBN0 382 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 PAQR8Q8TEZ7 354 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 EFHD2Q96C19 240 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 MTERF3Q96E29 417 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 ELP4Q96EB1 424 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 RILPQ96NA2 401 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 DPY30Q9C005 99 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 VIPAS39Q9H9C1 493 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 Q9N2J8 555 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 ERRFI1Q9UJM3 462 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 C19orf53Q9UNZ5 99 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 GPR55Q9Y2T6 319 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 CHCHD2Q9Y6H1 151 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 A0A087WV62 115 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 A0A1B0GTH9 108 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 A0A1W2PRB8 838 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 UPK1AO00322 258 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 CCL21O00585 134 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 GNB5O14775 395 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 HDAC3O15379 428 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 SNNO75324 88 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 TRAPPC6AO75865 159 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 TPOP07202 933 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ESRRAP11474 423 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 SOX18P35713 384 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 CDK9P50750 372 aaKnown RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 DIO3P55073 304 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 TP53BP2Q13625 1128 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 C4orf17Q53FE4 359 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 CMPK2Q5EBM0 449 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 RGS9BPQ6ZS82 235 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 OR2L13Q8N349 312 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 FAM109AQ8N4B1 249 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 SPPL2AQ8TCT8 520 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 GPR151Q8TDV0 419 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 NUDT8Q8WV74 236 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC9A6Q92581 669 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF75CPQ92670 426 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF764Q96H86 408 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 VSTM2LQ96N03 204 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 COL21A1Q96P44 957 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 MS4A4EQ96PG1 132 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 BTBD9Q96Q07 612 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ADOQ96SZ5 270 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 DUSP26Q9BV47 211 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 WDR55Q9H6Y2 383 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 MEAF6Q9HAF1 191 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 IL1RL2Q9HB29 575 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ACSS1Q9NUB1 689 aaPredicted RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 SUCOQ9UBS9 1254 aaKnown RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 ATP6V1HQ9UI12 483 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 TINAGQ9UJW2 476 aa10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 CNOT11Q9UKZ1 510 aaKnown RBP10.53□□□□□ -0.72
UBASH3B-208ENST00000533451 NCKAP5O14513 1909 aa10.52□□□□□ -0.72
UBASH3B-208ENST00000533451 PCNX1Q96RV3 2341 aa10.52□□□□□ -0.72
UBASH3B-208ENST00000533451 HECTD1Q9ULT8 2610 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 A0A1B0GUH1 482 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 A1L4Q6 167 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PRAMEF25A6NGN4 478 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 SDHDO14521 159 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PRRG2O14669 202 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 EMC8O43402 210 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 TBX19O60806 448 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 DIAPH2O60879 1101 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 UGT2B11O75310 529 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 C6orf47O95873 294 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 CELA3AP09093 270 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 EPHA3P29320 983 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 GABRA3P34903 492 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PTGS2P35354 604 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PPP2R2AP63151 447 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PSPHP78330 225 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 PRR5P85299 388 aa10.52□□□□□ -0.73
UBASH3B-208ENST00000533451 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms