RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 GGT3PA6NGU5 568 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 VNN2O95498 520 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CPNE6O95741 557 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 PET100P0DJ07 73 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 NAA10P41227 235 aaPredicted RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 FOXA1P55317 472 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 GALNT1Q10472 559 aaPredicted RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 BLOC1S3Q6QNY0 202 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CREB3L4Q8TEY5 395 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CNN2Q99439 309 aaKnown RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF471Q9BX82 626 aaPredicted RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ZBP1Q9H171 429 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ACAD8Q9UKU7 415 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 GMEB1Q9Y692 573 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 MYH7BA7E2Y1 1941 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 C1SP09871 688 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 PVRP15151 417 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 TRNP1Q6NT89 227 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF584Q8IVC4 421 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 RTP4Q96DX8 246 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 L3HYPDHQ96EM0 354 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC30A2Q9BRI3 323 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 MAGIXQ9H6Y5 334 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 RDH8Q9NYR8 311 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CMAHPQ9Y471 501 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 COL18A1P39060 1754 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 C13orf42A0A1B0GVH6 325 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CD38P28907 300 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 GNRHRP30968 328 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 OR6C2Q9NZP2 312 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 S100A1P23297 94 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 GPR4P46093 362 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 EID2Q8N6I1 236 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 TANKQ92844 425 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ATOH1Q92858 354 aaPredicted RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 NUFIP1Q9UHK0 495 aaKnown RBP14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 PCDHGA6Q9Y5G7 932 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 DNAJC15Q9Y5T4 150 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 USP3Q9Y6I4 520 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 ZSCAN5BA6NJL1 495 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 LDB3O75112 727 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 EGFP01133 1207 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 CSNK1DP48730 415 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 OR8S1Q8NH09 359 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 C2orf42Q9NWW7 574 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC9B1P1A6NJY1 282 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 DIRAS3O95661 229 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 KCNAB2Q13303 367 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ARL6IP1Q15041 203 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SFT2D3Q587I9 215 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 OR9A2Q8NGT5 310 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 GPR150Q8NGU9 434 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 FCAMRQ8WWV6 532 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM19Q96HH6 336 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF701Q9NV72 531 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 KCNIP1Q9NZI2 227 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SH3D21A4FU49 640 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RDH16O75452 317 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 PYCR1P32322 319 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ARG2P78540 354 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 DNASE1L3Q13609 305 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ERV3-1Q14264 604 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 C6orf132Q5T0Z8 1188 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ANKRD54Q6NXT1 300 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 HS3ST5Q8IZT8 346 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ACBD7Q8N6N7 88 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ADAMTS19Q8TE59 1207 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ARL5BQ96KC2 179 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 A0A0A6YYC8 382 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 I3L1I5 382 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 XPNPEP2O43895 674 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 DNAJB5O75953 348 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 IFNA7P01567 189 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 FAM189BP81408 668 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 GRK1Q15835 563 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC18B1Q6NT16 456 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 BAIAP2L2Q6UXY1 529 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 METTL25Q8N6Q8 603 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 NEIL2Q969S2 332 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RHBDF1Q96CC6 855 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 ANKRD28O15084 1053 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RBBP9O75884 186 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 MMP2P08253 660 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 IGFBP6P24592 240 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 FXYD6P3P58550 94 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 PIGFQ07326 219 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 GAREM2Q75VX8 874 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RAB11FIP2Q7L804 512 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 WDR53Q7Z5U6 358 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 NEIL3Q8TAT5 605 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 HHIPL1Q96JK4 782 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 CCM2LQ9NUG4 571 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 KLHL42Q9P2K6 505 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SPEF1Q9Y4P9 236 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 FXYD6-FXYD2A0A087WZ82 144 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 A0A1W2PPK0 400 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms