RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ATAD3BQ5T9A4 648 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 PGM2L1Q6PCE3 622 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 C16orf62Q7Z3J2 963 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NET1Q7Z628 596 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 MICU2Q8IYU8 434 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 ANKFN1Q8N957 763 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 ADIPOR1Q96A54 375 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 RMND5BQ96G75 393 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 REXO5Q96IC2 774 aaKnown RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 IP6K3Q96PC2 410 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 DCBLD2Q96PD2 775 aa17.64■□□□□ 0.41
SMPD1-205ENST00000531303 CCNL2Q96S94 520 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 NXF5Q9H1B4 397 aaKnown RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 GPR55Q9Y2T6 319 aaPredicted RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 URB1O60287 2271 aaKnown RBP17.64■□□□□ 0.41
SMPD1-205ENST00000531303 MED19A0JLT2 244 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ELOVL7A1L3X0 281 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 PRAMEF27A3QJZ7 478 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 DNAJA2O60884 412 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 NKX2-2O95096 273 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 CT45A8P0DMV1 189 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 CT45A9P0DMV2 189 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ITGAMP11215 1152 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 BMP2P12643 396 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 MAP3K8P41279 467 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 PPICP45877 212 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 CDK6Q00534 326 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 VMACQ2NL98 169 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 GPAT3Q53EU6 434 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 CT45A2Q5DJT8 189 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 EXOSC6Q5RKV6 272 aaKnown RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 FIGNL1Q6PIW4 674 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 PRR22Q8IZ63 422 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 C11orf65Q8NCR3 313 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ELP5Q8TE02 316 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 SLC38A5Q8WUX1 472 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 FIG4Q92562 907 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 GATA6Q92908 595 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 LCORQ96JN0 433 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 RAB3IPQ96QF0 476 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 STACQ99469 402 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 DPH1Q9BZG8 443 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 Q9N2J8 555 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 MMP25Q9NPA2 562 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 EXD2Q9NVH0 621 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 P2RX2Q9UBL9 471 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 SLC7A8Q9UHI5 535 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 CACNA1AO00555 2505 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 TMEM247A6NEH6 219 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ZNF891A8MT65 544 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 C5orf58C9J3I9 102 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 WWP2O00308 870 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 EFSO43281 561 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ASNA1O43681 348 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 TFPTP0C1Z6 253 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ARAFP10398 606 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ICAM2P13598 275 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 AQP1P29972 269 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 MAGEA8P43361 318 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 POU6F2P78424 691 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 FUT5Q11128 374 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 SCARB2Q14108 478 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 RPS26P11Q5JNZ5 115 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 FCRLBQ6BAA4 426 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 TCTN3Q6NUS6 607 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 KBTBD2Q8IY47 623 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 OR5L2Q8NGL0 311 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 TMEM19Q96HH6 336 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 BTBD9Q96Q07 612 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 LMF1Q96S06 567 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 SPATA9Q9BWV2 254 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 BTBD2Q9BX70 525 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 MMADHCQ9H3L0 296 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 A4GALTQ9NPC4 353 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 DUSP22Q9NRW4 184 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 THUMPD1Q9NXG2 353 aaKnown RBP17.63■□□□□ 0.41
SMPD1-205ENST00000531303 PCDHGB3Q9Y5G1 929 aa17.63■□□□□ 0.41
SMPD1-205ENST00000531303 ARGFXA6NJG6 315 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 AGR2O95994 175 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 DRD5P21918 477 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 HTR1EP28566 365 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 ST13P50502 369 aaKnown RBP17.62■□□□□ 0.41
SMPD1-205ENST00000531303 DCAF7P61962 342 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 TXNL4AP83876 142 aaKnown RBP17.62■□□□□ 0.41
SMPD1-205ENST00000531303 MS4A2Q01362 244 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 CHAF1BQ13112 559 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 ZNF630Q2M218 657 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-205ENST00000531303 SPATS1Q496A3 300 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 DCAF10Q5QP82 559 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 ERICH5Q6P6B1 374 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 ZSCAN1Q8NBB4 408 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 TNIP2Q8NFZ5 429 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 HOXB13Q92826 284 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-205ENST00000531303 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
SMPD1-205ENST00000531303 FER1L6-AS2Q96M78 137 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 TMEM38AQ9H6F2 299 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 FBXO34Q9NWN3 711 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 GIN1Q9NXP7 522 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 CBLCQ9ULV8 474 aa17.62■□□□□ 0.41
SMPD1-205ENST00000531303 FREM2Q5SZK8 3169 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms