RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TRIM42Q8IWZ5 723 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 WDSUB1Q8N9V3 476 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 TMBIM1Q969X1 311 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SFXN2Q96NB2 322 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ZNF382Q96SR6 550 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 FMO2Q99518 471 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 STMN4Q9H169 189 aaPredicted RBP15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PLEKHF2Q9H8W4 249 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DLL4Q9NR61 685 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 BEX4Q9NWD9 120 aaPredicted RBP15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GALNT8Q9NY28 637 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 EHD3Q9NZN3 535 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 NDRG3Q9UGV2 375 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DKKL1Q9UK85 242 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PACSIN3Q9UKS6 424 aa15.89■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MPDZO75970 2070 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 A0A087WUV0 522 aaPredicted RBP15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SH3D21A4FU49 640 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MANBAO00462 879 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CASKO14936 926 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SLITRK5O94991 958 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 OR4F21O95013 312 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CRHP06850 196 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HSD17B3P37058 310 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 AGFG1P52594 562 aaKnown RBP15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PNLIPRP2P54317 469 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CDH13P55290 713 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MRPS35P82673 323 aaKnown RBP15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DUSP2Q05923 314 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 LTB4RQ15722 352 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 BCL2A1Q16548 175 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 WHAMMP3Q1A5X7 153 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 OR2A2Q6IF42 318 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GRAMD2AQ8IUY3 354 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MMP21Q8N119 569 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SENP1Q9P0U3 644 aa15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 EIF3LQ9Y262 564 aaKnown RBP15.88■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 A0A1B0GTL3 188 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GNG14A0A1W2PPG7 69 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 C2orf72A6NCS6 295 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 POC1B-GALNT4F8VUJ3 575 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PLOD2O00469 737 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HCRTR2O43614 444 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PCDH7O60245 1069 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 TSPAN2O60636 221 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ULK1O75385 1050 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SUPT7LO94864 414 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HRGP04196 525 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 IL3P08700 152 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CT45A8P0DMV1 189 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CT45A9P0DMV2 189 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ZNF708P17019 499 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HMOX2P30519 316 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SOX18P35713 384 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 LHX2P50458 406 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SRYQ05066 204 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ACSM2AQ08AH3 577 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CT45A2Q5DJT8 189 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ACSM2BQ68CK6 577 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DESI1Q6ICB0 168 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.131e-8■□□□□ 9.8
CKLF-CMTM1-202ENST00000527845 RPS27LQ71UM5 84 aaKnown RBP15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CHMP1BQ7LBR1 199 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 LUZP2Q86TE4 346 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 BIVMQ86UB2 503 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CCDC116Q8IYX3 515 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 FAM9CQ8IZT9 166 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CDYL2Q8N8U2 506 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 RDH11Q8TC12 318 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DCAKDQ8WVC6 231 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 RNF138Q8WVD3 245 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 INTS12Q96CB8 462 aaKnown RBP15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MTBPQ96DY7 904 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 VSTM2LQ96N03 204 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ADOQ96SZ5 270 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 TAS2R9Q9NYW1 312 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HEY2Q9UBP5 337 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ZNF225Q9UK10 706 aa15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ZNF469Q96JG9 3925 aaPredicted RBP15.87■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PPP6CO00743 305 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MSTNO14793 375 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 PLOD3O60568 738 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 COQ9O75208 318 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ENO1P06733 434 aaKnown RBP15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 HOXB4P17483 251 aaPredicted RBP15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 TSPAN8P19075 237 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GRK2P25098 689 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 MPIP34949 423 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 DSCR4P56555 118 aaPredicted RBP15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 CLDN18P56856 261 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 EEFSECP57772 596 aaKnown RBP15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 FOXF2Q12947 444 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GANABQ14697 944 aaKnown RBP15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 ZNF678Q5SXM1 525 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 GPRIN3Q6ZVF9 776 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 P4HA3Q7Z4N8 544 aa15.86■□□□□ 0.13
CKLF-CMTM1-202ENST00000527845 SLC22A9Q8IVM8 553 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms