RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	NCF4	Q15080	339 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	PTGES3	Q15185	160 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	BAK1	Q16611	211 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	YIF1B	Q5BJH7	314 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	XKR6	Q5GH73	641 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC25A30	Q5SVS4	291 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	KIAA0895L	Q68EN5	471 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ADNP2	Q6IQ32	1131 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM92B	Q6ZTR7	304 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	USP45	Q70EL2	814 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	NRARP	Q7Z6K4	114 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	GLRX5	Q86SX6	157 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	RAB43	Q86YS6	212 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	CACTIN-AS1	Q8N1I8	211 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ASCC1	Q8N9N2	400 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM46D	Q8NEK8	389 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	GPR32P1	Q8NGA4	272 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	WDR36	Q8NI36	951 aa	Known RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ADAMTS14	Q8WXS8	1223 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	MTERF3	Q96E29	417 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	PDXP	Q96GD0	296 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC35A5	Q9BS91	424 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	MED18	Q9BUE0	208 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRAF4	Q9BUZ4	470 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	RSPO3	Q9BXY4	272 aa	Predicted RBP	7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ATG10	Q9H0Y0	220 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLA2	Q9H6Q3	261 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ISYNA1	Q9NPH2	558 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	IMPAD1	Q9NX62	359 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	TAS2R9	Q9NYW1	312 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	B4GALT6	Q9UBX8	382 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ACAD8	Q9UKU7	415 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	STUB1	Q9UNE7	303 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	ANGPT4	Q9Y264	503 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	CMAHP	Q9Y471	501 aa		7.37	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3D	A0A087WVF3	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3I	A0A087WXS9	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3E	A0A087X179	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3K	A0A087X1G2	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033		A0A0B4J293	547 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033		A0A1W2PQ09	198 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033		A0A1W2PQ67	120 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRBC2	A0A5B9	178 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SHISA8	B8ZZ34	492 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3L	B9A6J9	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TLR4	O00206	839 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	FFAR1	O14842	300 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	FLRT2	O43155	660 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	GUCY1B2	O75343	617 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ENTPD6	O75354	484 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	FBXO24	O75426	580 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ALX3	O95076	343 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	GADD45G	O95257	159 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	IL1A	P01583	271 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	IGHV4-34	P06331	123 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	HBQ1	P09105	142 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3H	P0C7X1	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	GAA	P10253	952 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	OSM	P13725	252 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRKCA	P17252	672 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	C5AR1	P21730	350 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	AQP1	P29972	269 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RPS19	P39019	145 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RPL3	P39023	403 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	GRK6	P43250	576 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	BDKRB1	P46663	353 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	STK19	P49842	368 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	LIM2	P55344	173 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RPS13	P62277	151 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SNRPD1	P62314	119 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SEMG2	Q02383	582 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF91	Q05481	1191 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	HSPA14	Q0VDF9	509 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLAMF1	Q13291	335 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ELAVL3	Q14576	367 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	LARS2	Q15031	903 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	FLYWCH1	Q4VC44	716 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZMAT1	Q5H9K5	638 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	C6orf183	Q5T699	404 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	MFSD4B	Q5TF39	518 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SAXO2	Q658L1	398 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3G	Q6DHY5	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3C	Q6IPX1	549 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	AGTRAP	Q6RW13	159 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	CEACAM20	Q6UY09	585 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TMPRSS11A	Q6ZMR5	421 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	WDR53	Q7Z5U6	358 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRIM69	Q86WT6	500 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	LAX1	Q8IWV1	398 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	CLDN22	Q8N7P3	220 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	NANOGP1	Q8N7R0	232 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	AQP11	Q8NBQ7	271 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	PSD4	Q8NDX1	1056 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	VPS37A	Q8NEZ2	397 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	PROKR2	Q8NFJ6	384 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR7G3	Q8NG95	312 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms