RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ATG4DQ86TL0 474 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 NUDT13Q86X67 352 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 OR7G1Q8NGA0 311 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 OR52R1Q8NGF1 315 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 SMAP2Q8WU79 429 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 FBXW5Q969U6 566 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 TMCO6Q96DC7 493 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 COL21A1Q96P44 957 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 TACO1Q9BSH4 297 aaKnown RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF717Q9BY31 904 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-211ENST00000523441 DSN1Q9H410 356 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CHODLQ9H9P2 273 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 LRTM1Q9HBL6 345 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 PFDN4Q9NQP4 134 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 SMYD2Q9NRG4 433 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 MED11Q9P086 117 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 PPP4R1LQ9P1A2 415 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 CDC42EP3Q9UKI2 254 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF337Q9Y3M9 751 aa10.45□□□□□ -0.74
SDCBP-211ENST00000523441 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 B4DXG7 233 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 K7EPI3 171 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 UBFD1O14562 309 aaKnown RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 AQP8O94778 261 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 NTN1O95631 604 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PORP16435 677 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PTMSP20962 102 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 S1PR1P21453 382 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PTX3P26022 381 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 IL12BP29460 328 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 GALNSP34059 522 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 KRT20P35900 424 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 CLDN15P56746 228 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 B3GALT5-AS1P59052 145 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PHEXP78562 749 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 MRPS35P82673 323 aaKnown RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 SNTA1Q13424 505 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 SLMAPQ14BN4 828 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 TRMT12Q53H54 448 aaKnown RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 STAC2Q6ZMT1 411 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 FAM214BQ7L5A3 538 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PDIK1LQ8N165 341 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 PDPRQ8NCN5 879 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 KBTBD8Q8NFY9 601 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 LILRB1Q8NHL6 650 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 GRK7Q8WTQ7 553 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 CAVIN3Q969G5 261 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 EFHD2Q96C19 240 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 RHNO1Q9BSD3 238 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 SHARPINQ9H0F6 387 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 STMN4Q9H169 189 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 RNF122Q9H9V4 155 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 EMC9Q9Y3B6 208 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 RNF115Q9Y4L5 304 aa10.44□□□□□ -0.74
SDCBP-211ENST00000523441 YLPM1P49750 1951 aaKnown RBP10.44□□□□□ -0.74
SDCBP-211ENST00000523441 KLK1P06870 262 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 CD3EP07766 207 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 PCSK2P16519 638 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 NAGAP17050 411 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 SERPINB1P30740 379 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 EIF1AXP47813 144 aaKnown RBP10.43□□□□□ -0.74
SDCBP-211ENST00000523441 NUDT6P53370 316 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 CASP9P55211 416 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 CORO7P57737 925 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 DUSP2Q05923 314 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 FASTKD3Q14CZ7 662 aaKnown RBP10.43□□□□□ -0.74
SDCBP-211ENST00000523441 ETFDHQ16134 617 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 SGO1Q5FBB7 561 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 SH2D4BQ5SQS7 431 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 LGSNQ5TDP6 509 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 ADAM5Q6NVV9 412 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 LARP4Q71RC2 724 aaKnown RBP eCLIP10.43□□□□□ -0.74
SDCBP-211ENST00000523441 FBXO36Q8NEA4 188 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 RHOJQ9H4E5 214 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 ALG2Q9H553 416 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 DDX31Q9H8H2 851 aaKnown RBP10.43□□□□□ -0.74
SDCBP-211ENST00000523441 MANSC1Q9H8J5 431 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
SDCBP-211ENST00000523441 MAT2BQ9NZL9 334 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 CFL2Q9Y281 166 aa10.43□□□□□ -0.74
SDCBP-211ENST00000523441 ALPK2Q86TB3 2170 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 OVOL3O00110 214 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 EIF1AYO14602 144 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 CBX7O95931 251 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 PPP3CBP16298 524 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 STMN1P16949 149 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 PIK3CBP42338 1070 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 SLC6A8P48029 635 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 RFX3P48380 749 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 DSCR4P56555 118 aaPredicted RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 EEFSECP57772 596 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 GPX6P59796 221 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 RPS3AP61247 264 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 ATP6V0D1P61421 351 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF844Q08AG5 666 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 PDIA2Q13087 525 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 PRICKLE4Q2TBC4 344 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms