RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SERPINA3P01011 423 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 NR0B1P51843 470 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLGLB1Q02325 96 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 KRT77Q7Z794 578 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 SDR16C5Q8N3Y7 309 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 PIK3R3Q92569 461 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF670-ZNF695F2Z2N8 137 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 POLR1CO15160 346 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 FURINP09958 794 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 NUDT1P36639 197 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 MAP3K8P41279 467 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 SLC6A9P48067 706 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 CSNK1G2P78368 415 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 HTRA4P83105 476 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 C18orf63Q68DL7 685 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 SHFQ7M4L6 423 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 PEG10Q86TG7 708 aaKnown RBP12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZFP41Q8N8Y5 198 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADAMTS18Q8TE60 1221 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMEM234Q8WY98 164 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 TFAP2CQ92754 450 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 SLC6A18Q96N87 628 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 NANSQ9NR45 359 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 EPHA6Q9UF33 1036 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR51B4Q9Y5P0 310 aa12.33□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRBV5-4A0A0C4DH59 114 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 OLFM2O95897 454 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 DPP6P42658 865 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 GPR143P51810 404 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 FAM83HQ6ZRV2 1179 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TMPRSS9Q7Z410 1059 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TECPR1Q7Z6L1 1165 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TANKQ92844 425 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 STRADBQ9C0K7 418 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 EBF1Q9UH73 591 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TNS1Q9HBL0 1735 aaKnown RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 ACOT8O14734 319 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TSPAN12O95859 305 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 MT-ND5P03915 603 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 OR1D4P47884 311 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TRA2BP62995 288 aaKnown RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 SERTAD2Q14140 314 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 CYHR1Q6ZMK1 362 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 DENND6BQ8NEG7 585 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 STOML2Q9UJZ1 356 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 EXOSC1Q9Y3B2 195 aaKnown RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 BCAT2O15382 392 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 ITGA10O75578 1167 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 CCNKO75909 580 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 OSMP13725 252 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 POLR2IP36954 125 aaKnown RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 CLCA4Q14CN2 919 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 SPHARQ15513 63 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 FAM69BQ5VUD6 431 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 IL22RA1Q8N6P7 574 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 ZNF420Q8TAQ5 688 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 COQ8BQ96D53 544 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 C16orf58Q96GQ5 468 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 COQ10AQ96MF6 247 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TREX2Q9BQ50 279 aaPredicted RBP12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 SLC23A2Q9UGH3 650 aa12.33□□□□□ -0.44
PCDHGB1-201ENST00000523390 AQP9O43315 295 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 GPR75O95800 540 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 ARAFP10398 606 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 CDK4P11802 303 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 DCKP27707 260 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 RBP7Q96R05 134 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 DPH1Q9BZG8 443 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 SEC14L4Q9UDX3 406 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 PCDHGA8Q9Y5G5 932 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 C7orf72A4D263 438 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 TP53I11O14683 189 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 PPM1BO75688 479 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 ECDO95905 644 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 IFNA6P05013 189 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 PYCR1P32322 319 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 SOX2P48431 317 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 NKX3-2P78367 333 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 REEP5Q00765 189 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 PUS10Q3MIT2 529 aaKnown RBP12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 TMEM196Q5HYL7 178 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
PCDHGB1-201ENST00000523390 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms