RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SDCCAG3Q96C92 435 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 BARD1Q99728 777 aaKnown RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 BTBD2Q9BX70 525 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 AMBRA1Q9C0C7 1298 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PARD6AQ9NPB6 346 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 CALML5Q9NZT1 146 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 NCDNQ9UBB6 729 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 TESMINQ9Y4I5 508 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 HEMK1Q9Y5R4 338 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 ALPPP05187 535 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF28P17035 718 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PRKACGP22612 351 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 RRM2P31350 389 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 DCDP81605 110 aaKnown RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 IL11RAQ14626 422 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 NSDHLQ15738 373 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 DCST2Q5T1A1 773 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PRAMEF8Q5VWM4 474 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PRAMEF7Q5VXH5 474 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 FIGNL1Q6PIW4 674 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 FRRS1Q6ZNA5 592 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 VRK2Q86Y07 508 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PACRGLQ8N7B6 248 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF321PQ8N8H1 164 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 OR5K1Q8NHB7 308 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 PTPMT1Q8WUK0 201 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF354BQ96LW1 612 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF300Q96RE9 604 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 STACQ99469 402 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 SDF2Q99470 211 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 WFDC6Q9BQY6 131 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 OR10A5Q9H207 317 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 SOX17Q9H6I2 414 aaPredicted RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 DUSP22Q9NRW4 184 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 THSD1Q9NS62 852 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 FBXO34Q9NWN3 711 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 LRCH1Q9Y2L9 728 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 SAMHD1Q9Y3Z3 626 aaKnown RBP14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 AP4B1Q9Y6B7 739 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 DSPPQ9NZW4 1301 aa14.37□□□□□ -0.11
CTNNA1-236ENST00000522792 COL27A1Q8IZC6 1860 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 PRAMEF2O60811 474 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 IFNW1P05000 195 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 MAP3K8P41279 467 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 RFX3P48380 749 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 OCA2Q04671 838 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 FUT7Q11130 342 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 FOXD4Q12950 439 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 NNATQ16517 81 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF385CQ66K41 422 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 TYW3Q6IPR3 259 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 LCN10Q6JVE6 187 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 LANCL3Q6ZV70 420 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 RBM45Q8IUH3 476 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 LACC1Q8IV20 430 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 SVOPLQ8N434 492 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 OR4D11Q8NGI4 311 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 APOBEC4Q8WW27 367 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 RASSF5Q8WWW0 418 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 BTBD9Q96Q07 612 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 SPATA5L1Q9BVQ7 753 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 REEP1Q9H902 201 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 SMURF2Q9HAU4 748 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ASCC3Q8N3C0 2202 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 TCRBV16S1A1N1A0A5B0 115 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 M0R3H8 397 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 NKX2-2O95096 273 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 EPPINO95925 133 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 CLPSP04118 112 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 HBQ1P09105 142 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ZGLP1P0C6A0 271 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 PABPC4LP0CB38 370 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ITIH1P19827 911 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 GALNSP34059 522 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 POU6F2P78424 691 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 PSG6Q00889 435 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 MC2RQ01718 297 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 BIKQ13323 160 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 DAG1Q14118 895 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNHIT3Q15649 155 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 GPR68Q15743 365 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 CMPK2Q5EBM0 449 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF311Q5JNZ3 666 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 CARM1Q86X55 608 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 ZNF615Q8N8J6 731 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 OR4N2Q8NGD1 307 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 C16orf52Q8NHV5 167 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 RMND5BQ96G75 393 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 SENP5Q96HI0 755 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 VSTM2LQ96N03 204 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 LMF2Q9BU23 707 aaKnown RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 OR8D2Q9GZM6 311 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 IFT80Q9P2H3 777 aaPredicted RBP14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 PCDHGB3Q9Y5G1 929 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 CLCA3PQ9Y6N3 262 aa14.36□□□□□ -0.11
CTNNA1-236ENST00000522792 NPIPA5A0A0B4J1W7 369 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 CENPVL1A0A0U1RR11 272 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 NPIPA7E9PJI5 369 aa14.35□□□□□ -0.11
CTNNA1-236ENST00000522792 H0YJX3 145 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms