RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CWC27Q6UX04 472 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 STAC2Q6ZMT1 411 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 VPS36Q86VN1 386 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 CENPLQ8N0S6 344 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR5AU1Q8NGC0 362 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 FBXO25Q8TCJ0 367 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 WBP1Q96G27 269 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 POM121L2Q96KW2 1035 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 EPYCQ99645 322 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TTYH2Q9BSA4 534 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 RPP25Q9BUL9 199 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 EDEM2Q9BV94 578 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 ERVK-6Q9BXR3 956 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 NACA2Q9H009 215 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 TMEM117Q9H0C3 514 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 LPAR2Q9HBW0 351 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 UBE2TQ9NPD8 197 aaPredicted RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 RBM28Q9NW13 759 aaKnown RBP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 MDFICQ9P1T7 246 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 THEGQ9P2T0 379 aa2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGN1P28-201ENST00000521340 DENND4BO75064 1496 aaPredicted RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 HFM1A2PYH4 1435 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SETD5Q9C0A6 1442 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CARMIL1Q5VZK9 1371 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CCDC7Q96M83 1385 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 AFF2P51816 1311 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGLV4-3A0A075B6K6 122 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 LRRC30A6NM36 301 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 NPIPA2E9PIF3 369 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 E2F3O00716 465 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CXCL11O14625 94 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SDC3O75056 442 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGSF6O95976 241 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGHV3-9P01782 118 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CAPN1P07384 714 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ANXA4P09525 319 aaPredicted RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SLC35G4P0C7Q5 338 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CD1DP15813 335 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 TSPAN8P19075 237 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 UCP1P25874 307 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ETV5P41161 510 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 RAG2P55895 527 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ACTR1AP61163 376 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF33BQ06732 778 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 FASTKQ14296 549 aaKnown RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 NECTIN1Q15223 517 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SLC36A3Q495N2 470 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 WLSQ5T9L3 541 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 RFWD3Q6PCD5 774 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF613Q6PF04 617 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 KDELC1Q6UW63 502 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 MOB2Q70IA6 237 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CYS1Q717R9 158 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 LPCAT2Q7L5N7 544 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 PARGQ86W56 976 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 FAM131BQ86XD5 332 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 KRTAP7-1Q8IUC3 87 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 PYROXD2Q8N2H3 581 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 Q8NBF4 154 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SUMF1Q8NBK3 374 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR52B6Q8NGF0 335 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR2T6Q8NHC8 308 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 FNDC8Q8TC99 324 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 GIPC3Q8TF64 312 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 BIRC7Q96CA5 298 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 FBXO17Q96EF6 278 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 MOCOSQ96EN8 888 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 C11orf24Q96F05 449 aaPredicted RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 DUX3Q96PT4 197 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 C19orf43Q9BQ61 176 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SYT15Q9BQS2 421 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 FGFBP2Q9BYJ0 223 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 RHOJQ9H4E5 214 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 IL1RL2Q9HB29 575 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZDHHC18Q9NUE0 388 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 TEX10Q9NXF1 929 aaPredicted RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 SMPD3Q9NY59 655 aaPredicted RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 WWOXQ9NZC7 414 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ATP6V1HQ9UI12 483 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF346Q9UL40 294 aaKnown RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 RNF6Q9Y252 685 aa2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.79□□□□□ -1.96
HMGN1P28-201ENST00000521340 CEP170Q5SW79 1584 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 ATP10AO60312 1499 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TEX14Q8IWB6 1497 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 MYOM3Q5VTT5 1437 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 FMN1Q68DA7 1419 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 UACAQ9BZF9 1416 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 NPIPA5A0A0B4J1W7 369 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGHV3-16A0A0C4DH30 117 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 IQCMA0A1B0GVH7 501 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 TTC26A0AVF1 554 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 BCLAF3A2AJT9 711 aaKnown RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 LRIT2A6NDA9 550 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 RNF212BA8MTL3 300 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 KRTAP16-1A8MUX0 517 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 NPIPA5E9PKD4 350 aa2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 NTN3O00634 580 aaPredicted RBP2.78□□□□□ -1.96
HMGN1P28-201ENST00000521340 MAPK13O15264 365 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms