RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 UBQLNLQ8IYU4 475 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 RNF175Q8N4F7 328 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 RASGEF1AQ8N9B8 481 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 GDPD1Q8N9F7 314 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 FAM181AQ8N9Y4 354 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 SIMC1Q8NDZ2 872 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 OR4K1Q8NGD4 311 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 BBS10Q8TAM1 723 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 BAHD1Q8TBE0 780 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF480Q8WV37 535 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 UBE2FQ969M7 185 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 ZBED6CLQ96FA7 236 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 PDXPQ96GD0 296 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 DHRS1Q96LJ7 313 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF354BQ96LW1 612 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC6A18Q96N87 628 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 OPALINQ96PE5 141 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC38A2Q96QD8 506 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 AIF1LQ9BQI0 150 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 MED18Q9BUE0 208 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 POLDIP3Q9BY77 421 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 POLR2J3Q9H1A7 115 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 DPEP2Q9H4A9 486 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 ANKRA2Q9H9E1 313 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 CACYBPQ9HB71 228 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC25A19Q9HC21 320 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 DIMT1Q9UNQ2 313 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 GSTK1Q9Y2Q3 226 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 EXOSC1Q9Y3B2 195 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
CTNNA1-223ENST00000520520 TP53BP1Q12888 1972 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 C17orf113A0A1B0GUU1 675 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 HMX3A6NHT5 357 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ANKDD1BA6NHY2 528 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 PCDH17O14917 1159 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 YY2O15391 372 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CHST10O43529 356 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TNFSF14O43557 240 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 VEGFDO43915 354 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CSO75390 466 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 NME6O75414 186 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 MTX2O75431 263 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 GCM2O75603 506 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 PRNPP04156 253 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 BCHEP06276 602 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TSPAN19P0C672 248 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TNFRSF1BP20333 461 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ITGB7P26010 798 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ELAVL4P26378 380 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TNFSF8P32971 234 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SDC2P34741 201 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TGFBR1P36897 503 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ETV3P41162 512 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC9A3P48764 834 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SMSP52788 366 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 MAPK12P53778 367 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TRA2BP62995 288 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 PPP3R1P63098 170 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF91Q05481 1191 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CD300CQ08708 224 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 RIPPLY1Q0D2K3 151 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 RPA4Q13156 261 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ENPP2Q13822 863 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 GANABQ14697 944 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ARHGAP19Q14CB8 494 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 QPRTQ15274 297 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 C3orf38Q5JPI3 329 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC25A30Q5SVS4 291 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 LCN1P1Q5VSP4 162 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ZNF770Q6IQ21 691 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 METAP1DQ6UB28 335 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TMIGD1Q6UXZ0 262 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CD300LDQ6UXZ3 194 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 RFLNAQ6ZTI6 216 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 Q6ZVL8 140 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 GDPD3Q7L5L3 318 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TSEN54Q7Z6J9 526 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TECPR1Q7Z6L1 1165 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 C17orf64Q86WR6 236 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 TRAPPC5Q8IUR0 188 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 DCUN1D3Q8IWE4 304 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CHST14Q8NCH0 376 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 IL17RDQ8NFM7 739 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 OR2A12Q8NGT7 310 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 C1orf216Q8TAB5 229 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 ENKURQ8TC29 256 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 UFD1Q92890 307 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SCAMP4Q969E2 229 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 CIDECQ96AQ7 238 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 RAD51AP1Q96B01 352 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 MOAP1Q96BY2 351 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 DTD2Q96FN9 168 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 OTUB1Q96FW1 271 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 SLC35G5Q96KT7 338 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 LINC00615Q96LM1 132 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 KCTD7Q96MP8 289 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 DEPDC7Q96QD5 511 aa8.13□□□□□ -1.11
CTNNA1-223ENST00000520520 KCNS3Q9BQ31 491 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms