RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC35A4Q96G79 324 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 UGT2B28Q9BY64 529 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 PRDM14Q9GZV8 571 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 ANKRA2Q9H9E1 313 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 FOLH1BQ9HBA9 442 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 GALNT9Q9HCQ5 603 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 SERHLQ9NQF3 203 aa12.47□□□□□ -0.41
TCOF1-215ENST00000515516 POLR3HQ9Y535 204 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-215ENST00000515516 GTF3C1Q12789 2109 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 MYO1GB0I1T2 1018 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 JUNP05412 331 aaKnown RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CT45A8P0DMV1 189 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CT45A9P0DMV2 189 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CYP4B1P13584 511 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 UQCRC1P31930 480 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 SOX18P35713 384 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 PNLIPRP2P54317 469 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CORO7P57737 925 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 ZNHIT3Q15649 155 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CEBPEQ15744 281 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CT45A2Q5DJT8 189 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 FAM71E1Q6IPT2 247 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 NOXRED1Q6NXP6 359 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 AAGABQ6PD74 315 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 IKBIPQ70UQ0 350 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CDH24Q86UP0 819 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 PLCZ1Q86YW0 608 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 C4orf33Q8N1A6 199 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 TNIP2Q8NFZ5 429 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 OR7G2Q8NG99 324 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 WDYHV1Q96HA8 205 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 VSTM2LQ96N03 204 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 CALHM2Q9HA72 323 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 MYNNQ9NPC7 610 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 DDX18Q9NVP1 670 aaKnown RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 TAS2R10Q9NYW0 307 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 DKKL1Q9UK85 242 aa12.46□□□□□ -0.41
TCOF1-215ENST00000515516 MRTO4Q9UKD2 239 aaKnown RBP12.46□□□□□ -0.41
TCOF1-215ENST00000515516 A0A087WV62 115 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 CD8B2A6NJW9 211 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 H0Y3Z8 333 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 SYT5O00445 386 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 TSPAN2O60636 221 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 TRIM13O60858 407 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 CEACAM8P31997 349 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-215ENST00000515516 PTGDSP41222 190 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 KIR2DL3P43628 341 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 CLK3P49761 638 aaKnown RBP12.45□□□□□ -0.42
TCOF1-215ENST00000515516 ASCL1P50553 236 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 IFFO1Q0D2I5 559 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 IFNEQ86WN2 208 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 C10orf107Q8IVU9 208 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 NTNG2Q96CW9 530 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 TRMOQ9BU70 441 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 L2HGDHQ9H9P8 463 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 LRTM1Q9HBL6 345 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 SDHAF3Q9NRP4 125 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 C1orf109Q9NX04 203 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 TAS2R7Q9NYW3 318 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 FIS1Q9Y3D6 152 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 WIF1Q9Y5W5 379 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
TCOF1-215ENST00000515516 ABCA12Q86UK0 2595 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 AZIN1O14977 448 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 NEFHP12036 1026 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 CPN1P15169 458 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 CTSSP25774 331 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 SRD5A2P31213 254 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 OPRM1P35372 400 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 MC3RP41968 323 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 DGKQP52824 942 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 PSMD4P55036 377 aaKnown RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 WNT3P56703 355 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 SRYQ05066 204 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 SLC18A2Q05940 514 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 DECR1Q16698 335 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 CYP27C1Q4G0S4 372 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 NPSR1Q6W5P4 371 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 TRIM42Q8IWZ5 723 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 RIBC1Q8N443 379 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 OR4K17Q8NGC6 315 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 ZPLD1Q8TCW7 415 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 EFHD2Q96C19 240 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-215ENST00000515516 SFXN2Q96NB2 322 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 AMDHD1Q96NU7 426 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 OR2B2Q9GZK3 357 aa12.44□□□□□ -0.42
TCOF1-215ENST00000515516 C12orf65Q9H3J6 166 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms