RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 IL12BP29460 328 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 MC3RP41968 323 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 KIR3DL1P43629 444 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 RPL38P63173 70 aaKnown RBP22.39■■□□□ 1.17
SNF8-213ENST00000514929 PSPHP78330 225 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 SNTA1Q13424 505 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 RTL6Q6ICC9 239 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 NPSR1Q6W5P4 371 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 ZCCHC23Q6ZST2 131 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 SLC44A2Q8IWA5 706 aaPredicted RBP22.39■■□□□ 1.17
SNF8-213ENST00000514929 CLYBLQ8N0X4 340 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 MREGQ8N565 214 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 LILRB4Q8NHJ6 448 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 GFM2Q969S9 779 aaKnown RBP22.39■■□□□ 1.17
SNF8-213ENST00000514929 ADOQ96SZ5 270 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 TMEM109Q9BVC6 243 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 GLIPR2Q9H4G4 154 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 GALNT9Q9HCQ5 603 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 OR10H1Q9Y4A9 318 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 PHF3Q92576 2039 aaKnown RBP22.39■■□□□ 1.17
SNF8-213ENST00000514929 CACNA1CQ13936 2221 aa22.39■■□□□ 1.17
SNF8-213ENST00000514929 C2orf72A6NCS6 295 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 TMEM233B4DJY2 109 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 CREB1P16220 341 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 KRT71Q3SY84 523 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 GDF7Q7Z4P5 450 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 AGR3Q8TD06 166 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 TWIST2Q8WVJ9 160 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 NTNG2Q96CW9 530 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 SLC35A4Q96G79 324 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 AMDHD1Q96NU7 426 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 CCT7Q99832 543 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 DDX18Q9NVP1 670 aaKnown RBP22.38■■□□□ 1.17
SNF8-213ENST00000514929 PCDHGB3Q9Y5G1 929 aa22.38■■□□□ 1.17
SNF8-213ENST00000514929 SNPHO15079 494 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 TSPAN2O60636 221 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 SDC1P18827 310 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 PTPN6P29350 595 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 PTGDSP41222 190 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 EFR3AQ14156 821 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 GALNTL6Q49A17 601 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 RFTN2Q52LD8 501 aaPredicted RBP22.37■■□□□ 1.17
SNF8-213ENST00000514929 SH2D4BQ5SQS7 431 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 LARP4Q71RC2 724 aaKnown RBP eCLIP22.37■■□□□ 1.174e-6■□□□□ 9.6
SNF8-213ENST00000514929 ULK2Q8IYT8 1036 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 FCRL1Q96LA6 429 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 TSSK3Q96PN8 268 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 UCK2Q9BZX2 261 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 KCNJ16Q9NPI9 418 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 C19orf53Q9UNZ5 99 aaPredicted RBP22.37■■□□□ 1.17
SNF8-213ENST00000514929 MAPRE3Q9UPY8 281 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 SLC6A5Q9Y345 797 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 TMED5Q9Y3A6 229 aa22.37■■□□□ 1.17
SNF8-213ENST00000514929 NKX2-6A6NCS4 301 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 FAM47E-STBD1D6RA91 191 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 PLOD2O00469 737 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 PIP5K1BO14986 540 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 LSM1O15116 133 aaKnown RBP22.36■■□□□ 1.17
SNF8-213ENST00000514929 PDPK1O15530 556 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 AKAP10O43572 662 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 SERPINB5P36952 375 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 CRYZQ08257 329 aaKnown RBP22.36■■□□□ 1.17
SNF8-213ENST00000514929 UGT3A2Q3SY77 523 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 EIPR1Q53HC9 387 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 WIPI1Q5MNZ9 446 aaPredicted RBP22.36■■□□□ 1.17
SNF8-213ENST00000514929 ANKRD26P1Q6NSI1 321 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 PPCDCQ96CD2 204 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 REEP4Q9H6H4 257 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 SERHLQ9NQF3 203 aa22.36■■□□□ 1.17
SNF8-213ENST00000514929 ESPNB1AK53 854 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 UPK1AO00322 258 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 RGS16O15492 202 aaPredicted RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 TYROBPO43914 113 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 BPGMP07738 259 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 ZFP36L2P47974 494 aaKnown RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 PNLIPRP2P54317 469 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 MRPS22P82650 360 aaKnown RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 PSG6Q00889 435 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 ZNF844Q08AG5 666 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 YRDCQ86U90 279 aaKnown RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 OR2L13Q8N349 312 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 FAM83FQ8NEG4 500 aaPredicted RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 OR4N2Q8NGD1 307 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 CLHC1Q8NHS4 586 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 EFHD2Q96C19 240 aaPredicted RBP22.35■■□□□ 1.17
SNF8-213ENST00000514929 ELP4Q96EB1 424 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 TIMP4Q99727 224 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 SPOCK3Q9BQ16 436 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 BAIAP2L1Q9UHR4 511 aa22.35■■□□□ 1.17
SNF8-213ENST00000514929 A0A0G2JNJ9 132 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 CBR3O75828 277 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 GPC1P35052 558 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 GCKP35557 465 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 HSPB3Q12988 150 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 ZNHIT3Q15649 155 aaPredicted RBP22.34■■□□□ 1.17
SNF8-213ENST00000514929 MEX3BQ6ZN04 569 aaKnown RBP22.34■■□□□ 1.17
SNF8-213ENST00000514929 ZNF551Q7Z340 670 aaPredicted RBP22.34■■□□□ 1.17
SNF8-213ENST00000514929 PM20D2Q8IYS1 436 aa22.34■■□□□ 1.17
SNF8-213ENST00000514929 ZNF764Q96H86 408 aaPredicted RBP22.34■■□□□ 1.17
SNF8-213ENST00000514929 ENKD1Q9H0I2 346 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms