RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	EPSTI1	Q96J88	318 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	FAM111A	Q96PZ2	611 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	CPXM1	Q96SM3	734 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	RUFY1	Q96T51	708 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	DDX50	Q9BQ39	737 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	C19orf24	Q9BVV8	132 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	CENPM	Q9NSP4	180 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	PNPLA3	Q9NST1	481 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	APOBEC3B	Q9UH17	382 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	STX8	Q9UNK0	236 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	ABCG2	Q9UNQ0	655 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	DIMT1	Q9UNQ2	313 aa	Known RBP	2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	AURKC	Q9UQB9	309 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	NTNG1	Q9Y2I2	539 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	RNF115	Q9Y4L5	304 aa		2.79	□□□□□ -1.96
MATR3-223	ENST00000514402	SYNRG	Q9UMZ2	1314 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	TYROBP	O43914	113 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	PEX11A	O75192	247 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	TRIM16	O95361	564 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	HOXC4	P09017	264 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	KRT13	P13646	458 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	VCL	P18206	1134 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	RPA1	P27694	616 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	CTNNB1	P35222	781 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	PRPH	P41219	470 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	MSLN	Q13421	630 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	CD226	Q15762	336 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	INA	Q16352	499 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	HSP90AA5P	Q58FG0	334 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	CDC42EP5	Q6NZY7	148 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	LUZP1	Q86V48	1076 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	C14orf178	Q8N769	122 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	LPCAT1	Q8NF37	534 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	PSMA8	Q8TAA3	256 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	FBXO30	Q8TB52	745 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	SLC13A3	Q8WWT9	602 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	COG3	Q96JB2	828 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	RPGRIP1	Q96KN7	1286 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	SPATA13	Q96N96	652 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	OSBPL8	Q9BZF1	889 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	ADGRL4	Q9HBW9	690 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	DDX28	Q9NUL7	540 aa	Known RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	KLRF1	Q9NZS2	232 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	TRPC4	Q9UBN4	977 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	RPS6KB2	Q9UBS0	482 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	SLC9A8	Q9Y2E8	581 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	MRPS2	Q9Y399	296 aa	Known RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	TEX264	Q9Y6I9	313 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	CLCA3P	Q9Y6N3	262 aa		2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	COL4A4	P53420	1690 aa	Predicted RBP	2.78	□□□□□ -1.96
MATR3-223	ENST00000514402	SYNJ2	O15056	1496 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	IGLV8-61	A0A075B6I0	122 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402		A0A0A6YYC8	382 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SLC9B1P1	A6NJY1	282 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402		I3L1I5	382 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402		K7ERI5	159 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CACNB4	O00305	520 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SLC17A2	O00624	439 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CHEK1	O14757	476 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	ARPC1B	O15143	372 aa	Known RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	RIPK2	O43353	540 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SNX4	O95219	450 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	PTBP3	O95758	552 aa	Known RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	IGLV1-47	P01700	117 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CHRNG	P07510	517 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SFTPB	P07988	381 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	ETS1	P14921	441 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SERPINB6	P35237	376 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	GEM	P55040	296 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	VCP	P55072	806 aa	Known RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	STX17	P56962	302 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	GMFB	P60983	142 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	GFPT1	Q06210	699 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	LRRC74A	Q0VAA2	488 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	MAJIN	Q3KP22	176 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	AARD	Q4LEZ3	155 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	PAGE2B	Q5JRK9	111 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	SEL1L2	Q5TEA6	688 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	ZNF544	Q6NX49	715 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	ATRAID	Q6UW56	229 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	MIER3	Q7Z3K6	550 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	TMEM110	Q86TL2	294 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	GMCL1P1	Q8NEA9	526 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	DENND6B	Q8NEG7	585 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	URGCP	Q8TCY9	931 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	BCL2L2	Q92843	193 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	C5orf30	Q96GV9	206 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CXorf58	Q96LI9	332 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	IMMP1L	Q96LU5	166 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	CRACR2A	Q9BSW2	395 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	FUNDC2	Q9BWH2	189 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	ELOVL4	Q9GZR5	314 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	OPN3	Q9H1Y3	402 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	DPH5	Q9H2P9	285 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	RWDD1	Q9H446	243 aa	Predicted RBP	2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	POLE3	Q9NRF9	147 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	COMMD8	Q9NX08	183 aa		2.77	□□□□□ -1.97
MATR3-223	ENST00000514402	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.77	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms