RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NFU1Q9UMS0 254 aa13.38□□□□□ -0.27
CCHCR1-229ENST00000512418 WIF1Q9Y5W5 379 aa13.38□□□□□ -0.27
CCHCR1-229ENST00000512418 MED12Q93074 2177 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 H0Y3Z8 333 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ERN1O75460 977 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 REM1O75628 298 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 GOSR1O95249 250 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ENO1P06733 434 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CT45A8P0DMV1 189 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CT45A9P0DMV2 189 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 EPXP11678 715 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CD99P14209 185 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CHN1P15882 459 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 IMPDH1P20839 514 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ATP5F1P24539 256 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 DNASE1P24855 282 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 GCAP28676 217 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TIA1P31483 386 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 KRT20P35900 424 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 GFRA1P56159 465 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 LCP2Q13094 533 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CEBPEQ15744 281 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ERCC6LQ2NKX8 1250 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CT45A2Q5DJT8 189 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ADGRE4PQ86SQ3 457 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 PLCZ1Q86YW0 608 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 SLC22A9Q8IVM8 553 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 EXOSC8Q96B26 276 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 VSTM2LQ96N03 204 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ALPK1Q96QP1 1244 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ADOQ96SZ5 270 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TUBA1CQ9BQE3 449 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 SFXN3Q9BWM7 321 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 SHCBP1LQ9BZQ2 653 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 ANKRA2Q9H9E1 313 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 GIMAP4Q9NUV9 329 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 TAS2R10Q9NYW0 307 aa13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 PRRC2AP48634 2157 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-229ENST00000512418 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PLOD3O60568 738 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 TSPAN2O60636 221 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 RCBTB2O95199 551 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 IL12BP29460 328 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 SRD5A2P31213 254 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 GSTM5P46439 218 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 HTR6P50406 440 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PRKAA2P54646 552 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PKNOX1P55347 436 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 CORO7P57737 925 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PPP2R2AP63151 447 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 EFR3AQ14156 821 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 FBXW10Q5XX13 1052 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 GALNT18Q6P9A2 607 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 SCIMPQ6UWF3 145 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PAMR1Q6UXH9 720 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 TRMT10CQ7L0Y3 403 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 TRIM42Q8IWZ5 723 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 RDH11Q8TC12 318 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 RNF138Q8WVD3 245 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 KAT2AQ92830 837 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 WNT2BQ93097 391 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 L3HYPDHQ96EM0 354 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 C11orf24Q96F05 449 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 APIPQ96GX9 242 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 UCN2Q96RP3 112 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 SLC35C2Q9NQQ7 365 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 SENP1Q9P0U3 644 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 PLEKHA6Q9Y2H5 1048 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 ABCA4P78363 2273 aa13.36□□□□□ -0.27
CCHCR1-229ENST00000512418 MPDZO75970 2070 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 CLCA1A8K7I4 914 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 RIPK2O43353 540 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 GSTA1P08263 222 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 CHMP24386 653 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 MPIP34949 423 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 LHX2P50458 406 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 PNLIPRP2P54317 469 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 SRYQ05066 204 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 ZNF763Q0D2J5 394 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 FOXF2Q12947 444 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 NPSR1Q6W5P4 371 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 LARP4Q71RC2 724 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 CAMKMTQ7Z624 323 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 FAM9CQ8IZT9 166 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 LINC01560Q8TB33 94 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
CCHCR1-229ENST00000512418 MBD6Q96DN6 1003 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms