RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	PAK5	Q9P286	719 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	ATXN10	Q9UBB4	475 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	SNX12	Q9UMY4	172 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	GPR34	Q9UPC5	381 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	DLGAP4	Q9Y2H0	992 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	PTPRB	P23467	1997 aa		4.92	□□□□□ -1.62
MATR3-218	ENST00000511978	BPTF	Q12830	3046 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	FAM149A	A5PLN7	773 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	C2orf81	A6NN90	581 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CCL22	O00626	93 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GRID2	O43424	1007 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	BUB3	O43684	328 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	PLPP2	O43688	288 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	SRP72	O76094	671 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	SLC25A14	O95258	325 aa	Predicted RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	APRT	P07741	180 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TCP1	P17987	556 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	RPL22	P35268	128 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GRIA1	P42261	906 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	KCNJ1	P48048	391 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GNG11	P61952	73 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CDH17	Q12864	832 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	NFATC2	Q13469	925 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	PEX6	Q13608	980 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	POU6F1	Q14863	301 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TRIP13	Q15645	432 aa	Predicted RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	ZNF718	Q3SXZ3	478 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	ZNF672	Q499Z4	452 aa	Predicted RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	C14orf28	Q4W4Y0	310 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TMEM35A	Q53FP2	167 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	LDLRAP1	Q5SW96	308 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	PLEKHS1	Q5SXH7	462 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GPRC6A	Q5T6X5	926 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CCDC137	Q6PK04	289 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	C4orf22	Q6V702	233 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	PPP1R21	Q6ZMI0	780 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CCDC190	Q86UF4	302 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	MARCH9	Q86YJ5	346 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TRAPPC5	Q8IUR0	188 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	DNAAF3	Q8N9W5	541 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	OR52K1	Q8NGK4	314 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GDAP1	Q8TB36	358 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	MAPK15	Q8TD08	544 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	DTX3L	Q8TDB6	740 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	BRSK1	Q8TDC3	778 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	ACTRT1	Q8TDG2	376 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	UTP15	Q8TED0	518 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	NAT6	Q93015	286 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	MAGOHB	Q96A72	148 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	ULK4	Q96C45	1275 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	DNAJC1	Q96KC8	554 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	SMC6	Q96SB8	1091 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	GFI1	Q99684	422 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CCDC3	Q9BQI4	270 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	DPEP2	Q9H4A9	486 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	SYNDIG1	Q9H7V2	258 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TAAR2	Q9P1P5	351 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	CRLS1	Q9UJA2	301 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	POU2F3	Q9UKI9	436 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	KCNK6	Q9Y257	313 aa		4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	TDRD6	O60522	2096 aa	Known RBP	4.91	□□□□□ -1.62
MATR3-218	ENST00000511978	HEATR9	A2RTY3	570 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	ASPDH	A6ND91	283 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	TMEM8B	A6NDV4	472 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	OR2AG2	A6NM03	316 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978		D6RAR5	112 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	CHUK	O15111	745 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	KMO	O15229	486 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	CASC3	O15234	703 aa	Known RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	ZNHIT1	O43257	154 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	NUDT21	O43809	227 aa	Known RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	VEGFD	O43915	354 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	UGT1A9	O60656	530 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	CS	O75390	466 aa	Known RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	KRT36	O76013	467 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	CDK14	O94921	469 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	GAS8	O95995	478 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	KRT14	P02533	472 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	RPLP0	P05388	317 aa	Known RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	F7	P08709	466 aa	Predicted RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	FAM106CP	P0CH98	169 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	F3	P13726	295 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	SELL	P14151	372 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	ALOX12	P18054	663 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	UGT1A6	P19224	532 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	TPSB2	P20231	275 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	MSH3	P20585	1137 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	UGT1A4	P22310	534 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	HRH2	P25021	359 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	PBLD	P30039	288 aa	Predicted RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	CA5A	P35218	305 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	UGT1A3	P35503	534 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	UGT1A5	P35504	534 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	COIL	P38432	576 aa	Predicted RBP	4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	FNTA	P49354	379 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	PDX1	P52945	283 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	DLX5	P56178	289 aa		4.9	□□□□□ -1.63
MATR3-218	ENST00000511978	MAZ	P56270	477 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms