RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 KCNJ16Q9NPI9 418 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 SERHLQ9NQF3 203 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 SIRT5Q9NXA8 310 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 Q9UFV3 132 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 EXO1Q9UQ84 846 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 CCL27Q9Y4X3 112 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 TACC2O95359 2948 aa13.52□□□□□ -0.24
UBE2D3-228ENST00000508974 MYO1GB0I1T2 1018 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 SLC28A1O00337 649 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 RGS14O43566 566 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 AKAP10O43572 662 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 HPNP05981 417 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CT45A8P0DMV1 189 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CT45A9P0DMV2 189 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CREB1P16220 341 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 NAGAP17050 411 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 PTPN6P29350 595 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 GSTM5P46439 218 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CRYZQ08257 329 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CEBPEQ15744 281 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 GALNTL6Q49A17 601 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CT45A2Q5DJT8 189 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 DCST1Q5T197 706 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 KANK2Q63ZY3 851 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 TIGD3Q6B0B8 471 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 LARP4Q71RC2 724 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 FAM83FQ8NEG4 500 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 TCP10LQ8TDR4 215 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 BTBD9Q96Q07 612 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 TUBB1Q9H4B7 451 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 GLIPR2Q9H4G4 154 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 NPDC1Q9NQX5 325 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 C1orf109Q9NX04 203 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 MKS1Q9NXB0 559 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 LGALS13Q9UHV8 139 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.25
UBE2D3-228ENST00000508974 CREBBPQ92793 2442 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 INTS1Q8N201 2190 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 MED12Q93074 2177 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 C17orf51A8MQB3 221 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 TO15178 435 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 TOXO94900 526 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 CHEK2O96017 543 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 GABRA1P14867 456 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 ELAVL4P26378 380 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 ZFP36L2P47974 494 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 RFX3P48380 749 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 HSPB3Q12988 150 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 KIAA0040Q15053 153 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 OR5M10Q6IEU7 315 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 SLC30A6Q6NXT4 461 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 Q6ZSR9 355 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 ZNF551Q7Z340 670 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 LIX1LQ8IVB5 337 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 FAM76AQ8TAV0 307 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 TMCO6Q96DC7 493 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 ERP27Q96DN0 273 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 AMDHD1Q96NU7 426 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 TSSK3Q96PN8 268 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 TIMP4Q99727 224 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 DDX18Q9NVP1 670 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 DNAJC15Q9Y5T4 150 aa13.51□□□□□ -0.25
UBE2D3-228ENST00000508974 PDZD2O15018 2839 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 OR6C70A6NIJ9 312 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 PIP5K1BO14986 540 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 PLOD3O60568 738 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 TSPAN2O60636 221 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 COQ9O75208 318 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 BMP7P18075 431 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 SDC1P18827 310 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 TFF3Q07654 80 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 RFTN2Q52LD8 501 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 EMBQ6PCB8 327 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 SZRD1Q7Z422 152 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 WDSUB1Q8N9V3 476 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 OR14L1PQ8NHC6 308 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 TWIST2Q8WVJ9 160 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 LURAP1Q96LR2 239 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 TRIB1Q96RU8 372 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 SPOCK3Q9BQ16 436 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 TRMOQ9BU70 441 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 UGT2B28Q9BY64 529 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 ENKD1Q9H0I2 346 aa13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 STMN4Q9H169 189 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-228ENST00000508974 EQTNQ9NQ60 294 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms