RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MANFP55145 182 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR2B6P58173 313 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 TRA2BP62995 288 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ABATP80404 500 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 GPR18Q14330 331 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 PUM1Q14671 1186 aaKnown RBP eCLIP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR4C11Q6IEV9 310 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 TMPRSS11AQ6ZMR5 421 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SYT13Q7L8C5 426 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 DGLUCYQ7Z3D6 616 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 UBQLNLQ8IYU4 475 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 FAM26EQ8N5C1 309 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CLDN22Q8N7P3 220 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR8K5Q8NH50 307 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SLC38A5Q8WUX1 472 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 EXOSC8Q96B26 276 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MS4A6EQ96DS6 147 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MSANTD3Q96H12 275 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SNX18Q96RF0 628 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CNPPD1Q9BV87 410 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 POLDIP3Q9BY77 421 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 DDX31Q9H8H2 851 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 NEK6Q9HC98 313 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 HHATLQ9HCP6 504 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ISYNA1Q9NPH2 558 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ACSS1Q9NUB1 689 aaPredicted RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF221Q9UK13 617 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ADAM29Q9UKF5 820 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 HYKKA2RU49 373 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 FAM172BPA6NC97 362 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 GLOD5A6NK44 160 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 CTDSP2O14595 271 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 FFAR1O14842 300 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 MYL12BO14950 172 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RECKO95980 971 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 GSTM3P21266 225 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 NDUFS1P28331 727 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 CMPK1P30085 196 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 FRKP42685 505 aaPredicted RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RPS5P46782 204 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RABIFP47224 123 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 LIM2P55344 173 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RPS26P62854 115 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 SNRPNP63162 240 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 SCN1BQ07699 218 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 ILF3Q12906 894 aaKnown RBP eCLIP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 HSPB3Q12988 150 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 GNA13Q14344 377 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 SOWAHCQ53LP3 525 aaPredicted RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 PRRT3Q5FWE3 981 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 ARMC4Q5T2S8 1044 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 NDUFAF5Q5TEU4 345 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RSBN1Q5VWQ0 802 aaPredicted RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 KIAA0895LQ68EN5 471 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF425Q6IV72 752 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 TCTN3Q6NUS6 607 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 HSDL2Q6YN16 418 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 C6orf120Q7Z4R8 191 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RAB43Q86YS6 212 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 SLC34A3Q8N130 599 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 OR8H2Q8N162 312 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 TTLQ8NG68 377 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 OR10G6Q8NH81 332 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 ZBED6CLQ96FA7 236 aaPredicted RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 KCNS3Q9BQ31 491 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 ROGDIQ9GZN7 287 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 RNF167Q9H6Y7 350 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 LMAN1LQ9HAT1 526 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 EXOSC4Q9NPD3 245 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 POU2F3Q9UKI9 436 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 DIMT1Q9UNQ2 313 aaKnown RBP10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 HS3ST3A1Q9Y663 406 aa10.35□□□□□ -0.75
SH3RF1-203ENST00000508685 TRBV4-1A0A0J9YWV2 114 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 A0A1W2PRQ8 180 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 H3BN98 237 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 CSO75390 466 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 BCHEP06276 602 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 THEGLP0DJG4 465 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SPNP16150 400 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 MAGP20916 626 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 FUT4P22083 530 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 PTGER1P34995 402 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 RPS19P39019 145 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 CRYBB2P43320 205 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 RAB8AP61006 207 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 ZIC1Q15915 447 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SPDYE7PQ495Y7 208 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 HORMAD2Q8N7B1 307 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 FLVCR1-AS1Q8TAF5 88 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 KIAA1143Q96AT1 154 aaPredicted RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 TMEM19Q96HH6 336 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 OR2A14Q96R47 310 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 SDHCQ99643 169 aaPredicted RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 MED18Q9BUE0 208 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 POLR2J2Q9GZM3 115 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 TAS2R7Q9NYW3 318 aa10.34□□□□□ -0.75
SH3RF1-203ENST00000508685 P2RX2Q9UBL9 471 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms