RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ENO3P13929 434 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 GP9P14770 177 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 HOXB8P17481 243 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ENGP17813 658 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TSPAN8P19075 237 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 MAOAP21397 527 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 SRD5A2P31213 254 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CCKARP32238 428 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 DUTP33316 252 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 AVPR1AP37288 418 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EIF2S3P41091 472 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CBX5P45973 191 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PGGT1BP53609 377 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 COPB1P53618 953 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EMP2P54851 167 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 KCNK10P57789 538 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PSMC5P62195 406 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EEF1A1P68104 462 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EEF1A2Q05639 463 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 MADCAM1Q13477 382 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 FASTKD3Q14CZ7 662 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TAF13Q15543 124 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PSG3Q16557 428 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 RNASE12Q5GAN4 147 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 XKR4Q5GH76 650 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF658Q5TYW1 1059 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EEF1A1P5Q5VTE0 462 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 MFSD14CQ5VZR4 134 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 GGNBP1Q5YKI7 109 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 FAM171BQ6P995 826 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TRMT1LQ7Z2T5 733 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 DPY19L4Q7Z388 723 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ABHD12BQ7Z5M8 362 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CPEB2Q7Z5Q1 589 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 WDR53Q7Z5U6 358 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 GPR141Q7Z602 305 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 MAP7D3Q8IWC1 876 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PARP8Q8N3A8 854 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 FGFRL1Q8N441 504 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 C17orf78Q8N4C9 275 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 SPEM1Q8N4L4 309 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TEX26Q8N6G2 289 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EMC1Q8N766 993 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 NANOGP1Q8N7R0 232 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 SNX31Q8N9S9 440 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF248Q8NDW4 579 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TMEM104Q8NE00 496 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CHDHQ8NE62 594 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 NUDCD2Q8WVJ2 157 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ASB5Q8WWX0 329 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 HTR3CQ8WXA8 447 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ERGIC1Q969X5 290 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 OPTNQ96CV9 577 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF274Q96GC6 653 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CPB2Q96IY4 423 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 AKR1E2Q96JD6 320 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 CMKLR1Q99788 373 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 SELENOSQ9BQE4 189 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 NAT9Q9BTE0 207 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 LRRC1Q9BTT6 524 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 TSSK1BQ9BXA7 367 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 GANQ9H2C0 597 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 LRMDAQ9H2I8 198 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EBF3Q9H4W6 596 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 C5orf66Q9H5L9 145 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 DMAP1Q9NPF5 467 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 SLC17A7Q9P2U7 560 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PSMC3IPQ9P2W1 217 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 LRWD1Q9UFC0 647 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF490Q9ULM2 529 aaPredicted RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 ABCG2Q9UNQ0 655 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 EXOGQ9Y2C4 368 aaKnown RBP3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.9□□□□□ -1.791e-9■■□□□ 12
SMARCA5-202ENST00000508573 USP16Q9Y5T5 823 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 KPTNQ9Y664 436 aa3.9□□□□□ -1.79
SMARCA5-202ENST00000508573 PEG3Q9GZU2 1588 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 TRAV18A0A075B6X5 111 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 TRBV11-1A0A0K0K1C0 115 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 A0A1W2PPE3 182 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 SMCO3A2RU48 225 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 ZNF840PA6NDX5 716 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 CLIC1O00299 241 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 RNMTO43148 476 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 HSPA12AO43301 675 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 SEMA3DO95025 777 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 TXNDC12O95881 172 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 APRTP07741 180 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 CTSAP10619 480 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 HAPLN1P10915 354 aaPredicted RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 DARSP14868 501 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 ACADSP16219 412 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 CHRNA5P30532 468 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 YWHABP31946 246 aaKnown RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 CDH5P33151 784 aaPredicted RBP3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 UGT1A5P35504 534 aa3.89□□□□□ -1.79
SMARCA5-202ENST00000508573 SOX2P48431 317 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms