RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RSL1D1O76021 490 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 DDX5P17844 614 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 BMP5P22003 454 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 NTSP30990 170 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 UQCRC1P31930 480 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 PSMD4P55036 377 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 RIPPLY3P57055 190 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 KRTAP10-9P60411 292 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 RAE1P78406 368 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 MRPS35P82673 323 aaKnown RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 SORDQ00796 357 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 HMGCS1Q01581 520 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TESK1Q15569 626 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 LTB4RQ15722 352 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 NNATQ16517 81 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 EIPR1Q53HC9 387 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TCHHL1Q5QJ38 904 aaPredicted RBP13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TRIM46Q7Z4K8 759 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 IFNEQ86WN2 208 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 OR9A2Q8NGT5 310 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 OR14L1PQ8NHC6 308 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 MZB1Q8WU39 189 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TMBIM1Q969X1 311 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TRMOQ9BU70 441 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 C3orf14Q9HBI5 128 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 MYNNQ9NPC7 610 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 SLC6A5Q9Y345 797 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 WIF1Q9Y5W5 379 aa13.15□□□□□ -0.3
HMGCS1-203ENST00000507004 MYO1GB0I1T2 1018 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 NPIPB8E9PQR5 432 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 LINC01387J3KSC0 135 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 PLOD2O00469 737 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 TSPAN2O60636 221 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CT45A8P0DMV1 189 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CT45A9P0DMV2 189 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CHN1P15882 459 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CRHR1P34998 444 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 PTGDSP41222 190 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 HTR6P50406 440 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 NAGLUP54802 743 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 C2orf80Q0P641 193 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 GAB1Q13480 694 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 ZNHIT3Q15649 155 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 BCL2A1Q16548 175 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 FLYWCH1Q4VC44 716 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 CT45A2Q5DJT8 189 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 LARP4Q71RC2 724 aaKnown RBP eCLIP13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 MMP21Q8N119 569 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 TNIP2Q8NFZ5 429 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 ZNF764Q96H86 408 aaPredicted RBP13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 TRIB1Q96RU8 372 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 RHOXF2Q9BQY4 288 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 FOLH1BQ9HBA9 442 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 DNAJB12Q9NXW2 375 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 ABCG2Q9UNQ0 655 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 TIMM22Q9Y584 194 aa13.14□□□□□ -0.31
HMGCS1-203ENST00000507004 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 G3V2L1 256 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 H0Y3Z8 333 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 SLC28A1O00337 649 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 CTAG2O75638 210 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 PROCP04070 461 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 UROSP10746 265 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 NEFHP12036 1026 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 PRPH2P23942 346 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 SOX18P35713 384 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 DLX5P56178 289 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 EEFSECP57772 596 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 DUSP2Q05923 314 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 BTKQ06187 659 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 GANABQ14697 944 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 RNF165Q6ZSG1 346 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 WDSUB1Q8N9V3 476 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 CCDC63Q8NA47 563 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 RELL2Q8NC24 303 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 GOT1L1Q8NHS2 421 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 RNF138Q8WVD3 245 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 KAT2AQ92830 837 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 WNT2BQ93097 391 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 ADOQ96SZ5 270 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 SH3GL2Q99962 352 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 PIGMQ9H3S5 423 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 Q9N2J8 555 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 SERHLQ9NQF3 203 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 TAS2R10Q9NYW0 307 aa13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 C19orf53Q9UNZ5 99 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-203ENST00000507004 MAPRE3Q9UPY8 281 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms