RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 OVOL3O00110 214 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 BTN3A3O00478 584 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CCSO14618 274 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ADAM10O14672 748 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 STX11O75558 287 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 KRT36O76013 467 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 POP4O95707 220 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 PEX11BO96011 259 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CST1P01037 141 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SERPIND1P05546 499 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 PLEKP08567 350 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ITGA2P17301 1181 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF10P21506 573 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD1CP29017 333 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 MPGP29372 298 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RPL13AP40429 203 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 HTR2BP41595 481 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 BRCC3P46736 316 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 GYG1P46976 350 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RFX3P48380 749 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RASSF2P50749 326 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RAB9AP51151 201 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ACLYP53396 1101 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ABCE1P61221 599 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 NTHL1P78549 312 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZXDAP98168 799 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OGDHQ02218 1023 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC20A2Q08357 652 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TRAF3Q13114 568 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 MEF2DQ14814 521 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 EZH2Q15910 746 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CDKN3Q16667 212 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ACSF3Q4G176 576 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LGSNQ5TDP6 509 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 HECTD2Q5U5R9 776 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 MLIPQ5VWP3 458 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC8B1Q6J4K2 584 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC25A25Q6KCM7 469 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TTC23LQ6PF05 361 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 HSDL2Q6YN16 418 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LANCL3Q6ZV70 420 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ASB18Q6ZVZ8 466 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RHOUQ7L0Q8 258 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RD3Q7Z3Z2 195 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 NET1Q7Z628 596 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 DHDDSQ86SQ9 333 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 C17orf64Q86WR6 236 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 VRK2Q86Y07 508 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CACUL1Q86Y37 369 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD302Q8IX05 232 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CCDC65Q8IXS2 484 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 GABRG1Q8N1C3 465 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 GTPBP8Q8N3Z3 284 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 PGBD5Q8N414 524 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TEX26Q8N6G2 289 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LINC00469Q8N7U9 141 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC37A3Q8NCC5 494 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 NFAM1Q8NET5 270 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR52N5Q8NH56 324 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR1F12Q8NHA8 337 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RHEBL1Q8TAI7 183 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD300LFQ8TDQ1 290 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 C17orf50Q8WW18 174 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR1E3Q8WZA6 343 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SARAFQ96BY9 339 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 CERS2Q96G23 380 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SDSLQ96GA7 329 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 NAF1Q96HR8 494 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ART5Q96L15 291 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 FMO2Q99518 471 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TIMP4Q99727 224 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LLPHQ9BRT6 129 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 PARD6BQ9BYG5 372 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR2B2Q9GZK3 357 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 IL22Q9GZX6 179 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LRRN3Q9H3W5 708 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 NARFLQ9H6Q4 476 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ALG9Q9H6U8 611 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 EGLN3Q9H6Z9 239 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 PARVGQ9HBI0 331 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC17A5Q9NRA2 495 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SDR39U1Q9NRG7 319 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 DUS2Q9NX74 493 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 IFNKQ9P0W0 207 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 STX18Q9P2W9 335 aaKnown RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SIX4Q9UIU6 781 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 FBXL4Q9UKA2 621 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 FLVCR2Q9UPI3 526 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 VDAC3Q9Y277 283 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TIMM10BQ9Y5J6 103 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ALG6Q9Y672 507 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 AKNAQ7Z591 1439 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RPAP1Q9BWH6 1393 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P22-201ENST00000505315 SH3TC1Q8TE82 1336 aa3.25□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P22-201ENST00000505315 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms