RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CEBPEQ15744 281 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 NHSL2Q5HYW2 709 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 OR5M10Q6IEU7 315 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 FAM71E1Q6IPT2 247 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 TMEM81Q6P7N7 255 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 ARSKQ6UWY0 536 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 FRMD7Q6ZUT3 714 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 ZZZ3Q8IYH5 903 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 COL21A1Q96P44 957 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 SIRT5Q9NXA8 310 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 KCNN3Q9UGI6 736 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 STK38LQ9Y2H1 464 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 CCL27Q9Y4X3 112 aa14.8□□□□□ -0.04
SCLT1-204ENST00000503215 OR6C70A6NIJ9 312 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 HSPB2A8KAH6 182 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 MYO1GB0I1T2 1018 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 PLOD3O60568 738 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 ERN1O75460 977 aaKnown RBP14.79□□□□□ -0.04
SCLT1-204ENST00000503215 JUNP05412 331 aaKnown RBP14.79□□□□□ -0.04
SCLT1-204ENST00000503215 DDCP20711 480 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 TCEA1P23193 301 aaKnown RBP14.79□□□□□ -0.04
SCLT1-204ENST00000503215 TACR1P25103 407 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 CRHR1P34998 444 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 STARP49675 285 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 HEPACAMQ14CZ8 416 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 HSPB2Q16082 182 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 NSUN5P2Q63ZY6 315 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 CLEC6AQ6EIG7 209 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 TRIM46Q7Z4K8 759 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 SLC44A2Q8IWA5 706 aaPredicted RBP14.79□□□□□ -0.04
SCLT1-204ENST00000503215 FAM9CQ8IZT9 166 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 C4orf33Q8N1A6 199 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 EFHD2Q96C19 240 aaPredicted RBP14.79□□□□□ -0.04
SCLT1-204ENST00000503215 SLC35A4Q96G79 324 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 EGLN2Q96KS0 407 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 BBS4Q96RK4 519 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 TRIB1Q96RU8 372 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 OXSMQ9NWU1 459 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 FAM53CQ9NYF3 392 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 FLRT3Q9NZU0 649 aa14.79□□□□□ -0.04
SCLT1-204ENST00000503215 FAM47E-STBD1D6RA91 191 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 SYT5O00445 386 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 CPA3P15088 417 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 UQCRC1P31930 480 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 TIMP3P35625 211 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 MC3RP41968 323 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 GAS1P54826 345 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 DNAJB13P59910 316 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 PSG6Q00889 435 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 SRYQ05066 204 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 ZNF763Q0D2J5 394 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 SNTA1Q13424 505 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 ERCC6LQ2NKX8 1250 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.049e-7■■■■■ 30.5
SCLT1-204ENST00000503215 TMEM200AQ86VY9 491 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 TDRPQ86YL5 185 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 LACC1Q8IV20 430 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 TRIM42Q8IWZ5 723 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 C9orf106Q8NAJ2 232 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 OR2W6PQ8NHA6 318 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 CCDC126Q96EE4 140 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 SH3GL2Q99962 352 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 TUBA1CQ9BQE3 449 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 OR2B2Q9GZK3 357 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 GIMAP4Q9NUV9 329 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 MPDZO75970 2070 aa14.78□□□□□ -0.04
SCLT1-204ENST00000503215 CCDC151A5D8V7 595 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CDH16O75309 829 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CBR3O75828 277 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.04
SCLT1-204ENST00000503215 KRT4P19013 534 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 MPIP34949 423 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CCT5P48643 541 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 NCBP2P52298 156 aaKnown RBP eCLIP14.77□□□□□ -0.04
SCLT1-204ENST00000503215 KIAA0040Q15053 153 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 IMPG1Q17R60 797 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CFAP157Q5JU67 520 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CES4AQ5XG92 561 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 ANKRD26P1Q6NSI1 321 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 NOXRED1Q6NXP6 359 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 TMEM107Q6UX40 140 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 PLCZ1Q86YW0 608 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 C10orf107Q8IVU9 208 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 PM20D2Q8IYS1 436 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 SAMD14Q8IZD0 417 aaPredicted RBP14.77□□□□□ -0.04
SCLT1-204ENST00000503215 OR14L1PQ8NHC6 308 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 RNF138Q8WVD3 245 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 TMCO6Q96DC7 493 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 ERP27Q96DN0 273 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 G6PC3Q9BUM1 346 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 RTN4RQ9BZR6 473 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 GLIPR2Q9H4G4 154 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 MYNNQ9NPC7 610 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 CRIM1Q9NZV1 1036 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 GRID1Q9ULK0 1009 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 WIF1Q9Y5W5 379 aa14.77□□□□□ -0.04
SCLT1-204ENST00000503215 ANKHD1Q8IWZ3 2542 aaKnown RBP14.77□□□□□ -0.05
SCLT1-204ENST00000503215 CD8B2A6NJW9 211 aa14.76□□□□□ -0.05
SCLT1-204ENST00000503215 UPK1AO00322 258 aa14.76□□□□□ -0.05
SCLT1-204ENST00000503215 DVL2O14641 736 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms