RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 EEF1E1-BLOC1S5C9J1V9 151 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 H0Y3Z8 333 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 H3BQF6 201 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PLOD2O00469 737 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 GNB5O14775 395 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 EEF1E1O43324 174 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ZIC3O60481 467 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 SMIM24O75264 130 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 SIX3O95343 332 aaPredicted RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PPP3CBP16298 524 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 IL11P20809 199 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 NT5EP21589 574 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 DEKP35659 375 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 CD79BP40259 229 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 SERPINB9P50453 376 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PLTPP55058 493 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 IRF9Q00978 393 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 FOXF2Q12947 444 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 CSTF3Q12996 717 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 SNTB1Q13884 538 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 HEPACAMQ14CZ8 416 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 GUSBP1Q15486 140 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 CYP27C1Q4G0S4 372 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 MROH9Q5TGP6 573 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 FBXW10Q5XX13 1052 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 COMMD6Q7Z4G1 85 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 YRDCQ86U90 279 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 TMEM151AQ8N4L1 468 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PTGR2Q8N8N7 351 aaPredicted RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 FADS6Q8N9I5 356 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 OR4F6Q8NGB9 312 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 OR14L1PQ8NHC6 308 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF592Q92610 1267 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 METTL2AQ96IZ6 378 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 MARK4Q96L34 752 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 VSTM2LQ96N03 204 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 MRPL57Q9BQC6 102 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 BDH2Q9BUT1 245 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ITPAQ9BY32 194 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 MRPL1Q9BYD6 325 aaKnown RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 GSX2Q9BZM3 304 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 BRINP2Q9C0B6 783 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 DPH5Q9H2P9 285 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 GSX1Q9H4S2 264 aaPredicted RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 RNF122Q9H9V4 155 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 SDHAF3Q9NRP4 125 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ZDHHC18Q9NUE0 388 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PAQR5Q9NXK6 330 aaPredicted RBP5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 TAS2R10Q9NYW0 307 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 TAS2R9Q9NYW1 312 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 KLRF1Q9NZS2 232 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 VPS29Q9UBQ0 182 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 GRID1Q9ULK0 1009 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PLLPQ9Y342 182 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 ZNF780BQ9Y6R6 833 aa5.53□□□□□ -1.52
LSM3P4-201ENST00000502948 PCNX3Q9H6A9 2034 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 ARID1AO14497 2285 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 IGLV3-32A0A0A0MS00 114 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 DEFB108AA8MXU0 73 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 NPIPB8E9PQR5 432 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SMPD2O60906 423 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PSMG1O95456 288 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PDYNP01213 254 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 CGAP01215 116 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 KRT6AP02538 564 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 GBAP04062 536 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 KRT6BP04259 564 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 FCGR2AP12318 317 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 ADSLP30566 484 aaPredicted RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MPIP34949 423 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 CPA2P48052 419 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 KRT6CP48668 564 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PSMD4P55036 377 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 WNT3P56703 355 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 B3GALT5-AS1P59052 145 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PSG6Q00889 435 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TOMM20Q15388 145 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 ACKR1Q16570 336 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TRMT12Q53H54 448 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SPIN4Q56A73 249 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 Q5PR19 223 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TTC19Q6DKK2 380 aaPredicted RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM111BQ6SJ93 734 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 CLEC9AQ6UXN8 241 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TMEM64Q6YI46 380 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TIFABQ6ZNK6 161 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 PLD6Q8N2A8 252 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 MEIOBQ8N635 442 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 METTL25Q8N6Q8 603 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 OR52R1Q8NGF1 315 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 FAM76AQ8TAV0 307 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SLC44A1Q8WWI5 657 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 SELENOMQ8WWX9 145 aa5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 HOXB13Q92826 284 aaPredicted RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 INTS12Q96CB8 462 aaKnown RBP5.52□□□□□ -1.53
LSM3P4-201ENST00000502948 KLHL29Q96CT2 875 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms