RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SNTNA6NMZ2 147 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 J3KR12 359 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 HAS3O00219 553 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 CHEK1O14757 476 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 EIF3HO15372 352 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SYT7O43581 403 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRKAB2O43741 272 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 TIMM8AO60220 97 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 JAK2O60674 1132 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SORBS2O94875 1100 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PLAUP00749 431 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 GLAP06280 429 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRPS2P11908 318 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ENO3P13929 434 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 FCARP24071 287 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 NAMPTP43490 491 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PPP3CCP48454 512 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 RARRES1P49788 294 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SELENOVP59797 346 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 EEF1A2Q05639 463 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 DMPKQ09013 629 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 TCP10Q12799 353 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 FOXI1Q12951 378 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ILKQ13418 452 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPHARQ15513 63 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 EXT1Q16394 746 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SYPL1Q16563 259 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 DCAF4L1Q3SXM0 396 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ARMCX4Q5H9R4 360 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 CEP78Q5JTW2 689 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 CTSL3PQ5NE16 218 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PRAMEF17Q5VTA0 474 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 FRG2Q64ET8 278 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 NCAPH2Q6IBW4 605 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 FAM109BQ6ICB4 259 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 RNASEKQ6P5S7 137 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF841Q6ZN19 808 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 GPR141Q7Z602 305 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 VTCN1Q7Z7D3 282 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 C1orf52Q8N6N3 182 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR2AK2Q8NG84 335 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR10Q1Q8NGQ4 319 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR13J1Q8NGT2 312 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 GLYATL2Q8WU03 294 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SCFD1Q8WVM8 642 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ST8SIA1Q92185 356 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SEPT8Q92599 483 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 P3H4Q92791 437 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ABHD8Q96I13 439 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCNS3Q9BQ31 491 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 WRAP53Q9BUR4 548 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 LRRC2Q9BYS8 371 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAB34Q9BZG1 259 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 GANQ9H2C0 597 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACTL8Q9H568 366 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 DHX33Q9H6R0 707 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 MARCH7Q9H992 704 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 LRRC4Q9HBW1 653 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 PNRC2Q9NPJ4 139 aaKnown RBP3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC52A3Q9NQ40 469 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 HIF1ANQ9NWT6 349 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 MIOSQ9NXC5 875 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ERVK-19Q9WJR5 959 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 ELP1O95163 1332 aa3.93□□□□□ -1.78
HMGB1P21-201ENST00000502313 DOCK1Q14185 1865 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 COL6A3P12111 3177 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 PLIN4Q96Q06 1357 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CHD9Q3L8U1 2897 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LOC105371242A0A075B767 164 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCL15-CCL14A0A0B4J2E2 113 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 A0A1W2PPV4 95 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 GOLGA6L19H0YKK7 550 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LAD1O00515 517 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 TRDMT1O14717 391 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 DUX1O43812 170 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CNMDO75829 334 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 TXNDC12O95881 172 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 APOA1P02647 267 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FTH1P02794 183 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 LYNP07948 512 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 MMP3P08254 477 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ANXA4P09525 319 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACP2P11117 423 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 DBTP11182 482 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 FOSL2P15408 326 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NT5EP21589 574 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CMA1P23946 247 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 HNRNPH3P31942 346 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 HNRNPH1P31943 449 aaKnown RBP3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC26A2P50443 739 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDST2P52849 883 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CTSCP53634 463 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAD23BP54727 409 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CDH4P55283 916 aa3.92□□□□□ -1.78
HMGB1P21-201ENST00000502313 CDH12P55289 794 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms