RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MLC1Q15049 377 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 BICRALQ6AI39 1079 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 DESI1Q6ICB0 168 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 SLC30A6Q6NXT4 461 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 NPSR1Q6W5P4 371 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 KRTCAP2Q8N6L1 136 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 HGDQ93099 445 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF597Q96LX8 424 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 RILPQ96NA2 401 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 NODALQ96S42 347 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 ADOQ96SZ5 270 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 EXO5Q9H790 373 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 VIPAS39Q9H9C1 493 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
HSPG2-213ENST00000498495 MRTO4Q9UKD2 239 aaKnown RBP11.74□□□□□ -0.53
HSPG2-213ENST00000498495 TTC36A6NLP5 189 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 SLCO1B7G3V0H7 640 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 HDAC3O15379 428 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 EMC8O43402 210 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TSPAN2O60636 221 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 ICOSLGO75144 302 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TRIM3O75382 744 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TRAPPC6AO75865 159 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TPOP07202 933 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 RNF224P0DH78 156 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 EFNA1P20827 205 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MAN2A2P49641 1150 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 CDK9P50750 372 aaKnown RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 RELNP78509 3460 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MRPS22P82650 360 aaKnown RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 SNTA1Q13424 505 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 GAB1Q13480 694 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 EFR3AQ14156 821 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 PGS1Q32NB8 556 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 LSM12Q3MHD2 195 aaKnown RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 CYP27C1Q4G0S4 372 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MTFR2Q6P444 385 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TMEM81Q6P7N7 255 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 LARP4Q71RC2 724 aaKnown RBP eCLIP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TRILQ7L0X0 811 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 SZRD1Q7Z422 152 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 FGD2Q7Z6J4 655 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 DOLPP1Q86YN1 238 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 CHERPQ8IWX8 916 aaKnown RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 LRRC34Q8IZ02 419 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 EID3Q8N140 333 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 NUP43Q8NFH3 380 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 OR1J4Q8NGS1 313 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 NUDT8Q8WV74 236 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 OR5P2Q8WZ92 322 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF75CPQ92670 426 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 COQ8BQ96D53 544 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 TMEM41AQ96HV5 264 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 GNRHR2Q96P88 292 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 LMF2Q9BU23 707 aaKnown RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 DUSP26Q9BV47 211 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 DPY30Q9C005 99 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MEAF6Q9HAF1 191 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 Q9N2J8 555 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 QPCTLQ9NXS2 382 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 ASIC5Q9NY37 505 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 KLRF1Q9NZS2 232 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MARCOQ9UEW3 520 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-213ENST00000498495 CBLCQ9ULV8 474 aa11.73□□□□□ -0.53
HSPG2-213ENST00000498495 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 TRGV5A0A0B4J1U4 118 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 A0A1B0GVC2 190 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 NPIPA2E9PIF3 369 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 NPIPA3F8WFD2 350 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 GNB5O14775 395 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 CFLARO15519 480 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 SUSD5O60279 629 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 ZG16O60844 167 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 PSMG1O95456 288 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 IGHG3P01860 377 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 CELA3AP09093 270 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 GDF1P27539 372 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 GABRA3P34903 492 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 DIO3P55073 304 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 PRR5P85299 388 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 TOMM20Q15388 145 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 DECR1Q16698 335 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 WDR53Q7Z5U6 358 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 RIMKLAQ8IXN7 391 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 EFHD2Q96C19 240 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 SH3GL2Q99962 352 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms