RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 HMGCLL1Q8TB92 370 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 LNX1Q8TBB1 728 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 GANCQ8TET4 914 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 UBTD2Q8WUN7 234 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SELENOMQ8WWX9 145 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM158Q8WZ71 300 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 NDRG1Q92597 394 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF75CPQ92670 426 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 OSTF1Q92882 214 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 RBMXL1Q96E39 390 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 RBM41Q96IZ5 413 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 THOC3Q96J01 351 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SENP8Q96LD8 212 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CCNL2Q96S94 520 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CCT7Q99832 543 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SMR3AQ99954 134 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 NDUFAF3Q9BU61 184 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 RAB11FIP5Q9BXF6 653 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PRRG4Q9BZD6 226 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 LAT2Q9GZY6 243 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MIS12Q9H081 205 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM117Q9H0C3 514 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SLITRK6Q9H5Y7 841 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FAM124BQ9H5Z6 455 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FNDC4Q9H6D8 234 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 C8orf33Q9H7E9 229 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ACTR8Q9H981 624 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 MARCH7Q9H992 704 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FKRPQ9H9S5 495 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 FN3KRPQ9HA64 309 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CALHM2Q9HA72 323 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 APMAPQ9HDC9 416 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ASCL3Q9NQ33 180 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TCF7L2Q9NQB0 619 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SDR39U1Q9NRG7 319 aaPredicted RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 DDX28Q9NUL7 540 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 EXOC1Q9NV70 894 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRNAU1APQ9NX07 287 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 BARHL2Q9NY43 387 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 ARMCX1Q9P291 453 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 SIX4Q9UIU6 781 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 PTBP2Q9UKA9 531 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 TNNQ9UQP3 1299 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 RNF6Q9Y252 685 aa2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 CHTOPQ9Y3Y2 248 aaKnown RBP2.19□□□□□ -2.06
CKS1BP2-201ENST00000497342 NOTCH4Q99466 2003 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 PDS5AQ29RF7 1337 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CNTNAP2Q9UHC6 1331 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 SHANK1Q9Y566 2161 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GOLGA6L7A0A1B0GV03 622 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MFSD2BA6NFX1 497 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 NKX6-3A6NJ46 265 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 BECN2A8MW95 431 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 LACTBL1A8MY62 500 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 WASH3PC4AMC7 463 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 SPECC1L-ADORA2AF8WAN1 911 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 K7EQM0 130 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 PPEF2O14830 753 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MATN3O15232 486 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CASC3O15234 703 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 OGTO15294 1046 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 P2RX6O15547 441 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR4F21O95013 312 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 SYNGR4O95473 234 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GLUD1P00367 558 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GOT2P00505 430 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 VTNP04004 478 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF286BP0CG31 522 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 RRASP10301 218 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 ACP2P11117 423 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 HLA-DOBP13765 273 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYOD1P15172 320 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 POLR2CP19387 275 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 EFNA1P20827 205 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CALB2P22676 271 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GLRA1P23415 457 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 EPHA2P29317 976 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 RBMS1P29558 406 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GDI1P31150 447 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MAT2AP31153 395 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 STIP1P31948 543 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 PRDX2P32119 198 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CCKBRP32239 447 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MNDAP41218 407 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 P2RY2P41231 377 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 SLC1A6P48664 564 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 PGFP49763 221 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 PDX1P52945 283 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 ATP5IP56385 69 aaPredicted RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CD81P60033 236 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GALK2Q01415 458 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 BNC1Q01954 994 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 TNFRSF17Q02223 184 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MECOMQ03112 1051 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYBPHQ13203 477 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 SRSF6Q13247 344 aaKnown RBP2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 MAB21L1Q13394 359 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 CUL2Q13617 745 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 GPR18Q14330 331 aa2.18□□□□□ -2.06
CKS1BP2-201ENST00000497342 NFATC4Q14934 902 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms