RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PUDPQ08623 228 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 BNIP1Q12981 228 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 SCARB2Q14108 478 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 CLPPQ16740 277 aaPredicted RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 GPAT3Q53EU6 434 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 FAM133BQ5BKY9 247 aaKnown RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 TFDP3Q5H9I0 405 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 HIST2H2AA3Q6FI13 130 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 UFSP1Q6NVU6 142 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 KCTD9Q7L273 389 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 KRT77Q7Z794 578 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 CHCHD4Q8N4Q1 142 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 OR10H4Q8NGA5 316 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 OR4F17Q8NGA8 305 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 FIBINQ8TAL6 211 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 SRSF12Q8WXF0 261 aaKnown RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 DLX4Q92988 240 aaPredicted RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 OR4F4Q96R69 305 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 CACNG6Q9BXT2 260 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 SLC25A39Q9BZJ4 359 aaPredicted RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 CCSER1Q9C0I3 900 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 RAB26Q9ULW5 256 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 BARX2Q9UMQ3 279 aaPredicted RBP1.99□□□□□ -2.09
VPS26A-208ENST00000497022 TRBV7-9A0A0J9YWB2 115 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 TCP11X1B4DZS4 312 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 SLC28A1O00337 649 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 MAGEB4O15481 346 aaPredicted RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 CFLARO15519 480 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 GSTA1P08263 222 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 HIST1H2AGP0C0S8 130 aaPredicted RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 UROSP10746 265 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 CYP11B1P15538 503 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 CCNE1P24864 410 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 CTNNB1P35222 781 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 KRTAP10-10P60014 251 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 STX1BP61266 288 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 CAMK4Q16566 473 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 NKAIN2Q5VXU1 208 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 MEDAGQ5VYS4 303 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 IL34Q6ZMJ4 242 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 ZNF433Q8N7K0 673 aaPredicted RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 HIST1H2ACQ93077 130 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 OSBPL8Q9BZF1 889 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 AKIRIN1Q9H9L7 192 aaPredicted RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 STARD5Q9NSY2 213 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 ZCCHC3Q9NUD5 404 aaKnown RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 LHX3Q9UBR4 397 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 NARFQ9UHQ1 456 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 MAD2L2Q9UI95 211 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 PURGQ9UJV8 347 aaKnown RBP1.98□□□□□ -2.09
VPS26A-208ENST00000497022 ENTPD4Q9Y227 616 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 ZNF175Q9Y473 711 aa1.98□□□□□ -2.09
VPS26A-208ENST00000497022 NPIPA2E9PIF3 369 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 CCER2I3L3R5 266 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 ARPC1BO15143 372 aaKnown RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 IGSF6O95976 241 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 HPNP05981 417 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 APRTP07741 180 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 FERP16591 822 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 PTBP1P26599 531 aaKnown RBP eCLIP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 RBMXP38159 391 aaKnown RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 CAV2P51636 162 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 LINC00315P59091 139 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 LRRC63Q05C16 580 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 BCL2L1Q07817 233 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 EBI3Q14213 229 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 IFI44LQ53G44 452 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 OR2B11Q5JQS5 317 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 RANBP3LQ86VV4 465 aaPredicted RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 BBS1Q8NFJ9 593 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 ADAMTS16Q8TE57 1224 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 UBE2Q2Q8WVN8 375 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 IL22RA2Q969J5 263 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 ADPGKQ9BRR6 497 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 NLNQ9BYT8 704 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 CARD9Q9H257 536 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 NANOGQ9H9S0 305 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 GRPEL1Q9HAV7 217 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 MEPEQ9NQ76 525 aaPredicted RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 ZNF331Q9NQX6 463 aaPredicted RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 CYTL1Q9NRR1 136 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 ELOVL2Q9NXB9 296 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 TRMT6Q9UJA5 497 aaKnown RBP1.97□□□□□ -2.09
VPS26A-208ENST00000497022 DHRS7Q9Y394 339 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 USP6P35125 1406 aa1.97□□□□□ -2.09
VPS26A-208ENST00000497022 RAD54L2Q9Y4B4 1467 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 A0A1W2PRQ8 180 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 LRIT2A6NDA9 550 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 HTATSF1O43719 755 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 SDC3O75056 442 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 ZNF254O75437 659 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 MMP23AO75900 390 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 HSP90AB1P08238 724 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 VDRP11473 427 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 GLULP15104 373 aa1.96□□□□□ -2.1
VPS26A-208ENST00000497022 RPS2P15880 293 aaKnown RBP1.96□□□□□ -2.1
VPS26A-208ENST00000497022 SDC1P18827 310 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms