RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 ROPN1BQ9BZX4 212 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-246ENST00000496569 ROPN1Q9HAT0 212 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-246ENST00000496569 SERHLQ9NQF3 203 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 KLRF1Q9NZS2 232 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 PRODH2Q9UF12 536 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 ZDHHC2Q9UIJ5 367 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 CFL2Q9Y281 166 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 GPR55Q9Y2T6 319 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-246ENST00000496569 C15orf41Q9Y2V0 281 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 CSMD2Q7Z408 3487 aa11.16□□□□□ -0.62
HDLBP-246ENST00000496569 AKAP6Q13023 2319 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 ANKRD33BA6NCL7 494 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 SLC28A1O00337 649 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 BCKDKO14874 412 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 SNPHO15079 494 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 PDPK1O15530 556 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 RGS14O43566 566 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 ITM2AO43736 263 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 SUSD5O60279 629 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 NPHS1O60500 1241 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 TSPAN2O60636 221 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 ICOSLGO75144 302 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 BPGMP07738 259 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 GLI4P10075 376 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 COX6B1P14854 86 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 DRD5P21918 477 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 PRPH2P23942 346 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 PTPN6P29350 595 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 NTSP30990 170 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 MPIP34949 423 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 ETV4P43268 484 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 NAA20P61599 178 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 C1orf185Q5T7R7 199 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 WLSQ5T9L3 541 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 OR5M10Q6IEU7 315 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 GALNT10Q86SR1 603 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 LIX1LQ8IVB5 337 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 OR10Q1Q8NGQ4 319 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 CA5BP1Q8WTZ4 195 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 RND1Q92730 232 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 SARAFQ96BY9 339 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 NTNG2Q96CW9 530 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 TMEM41AQ96HV5 264 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 FCRL1Q96LA6 429 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 ZIM3Q96PE6 472 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 TTYH2Q9BSA4 534 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 C1orf50Q9BV19 199 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 UBQLN3Q9H347 655 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 CENPHQ9H3R5 247 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 EQTNQ9NQ60 294 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 NPDC1Q9NQX5 325 aaPredicted RBP11.15□□□□□ -0.62
HDLBP-246ENST00000496569 COQ3Q9NZJ6 369 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 B4GALT7Q9UBV7 327 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 TRAF6Q9Y4K3 522 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 PDZD2O15018 2839 aa11.15□□□□□ -0.62
HDLBP-246ENST00000496569 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 GXYLT2A0PJZ3 443 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 OR14I1A6ND48 311 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 H3BQF6 201 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 UPK1AO00322 258 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TO15178 435 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 ACOX3O15254 700 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 SCO2O43819 266 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 PLOD3O60568 738 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 HCN1O60741 890 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 PEX11AO75192 247 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 NEFHP12036 1026 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 CYP4B1P13584 511 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 AGAP20933 346 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 RFX3P48380 749 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 PSG6Q00889 435 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 CRYZQ08257 329 aaKnown RBP11.14□□□□□ -0.63
HDLBP-246ENST00000496569 SNTB1Q13884 538 aaKnown RBP11.14□□□□□ -0.63
HDLBP-246ENST00000496569 MPP2Q14168 576 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TBCELQ5QJ74 424 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TIGD3Q6B0B8 471 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 B3GNT6Q6ZMB0 384 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 SEM1Q6ZVN7 128 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 LARP4Q71RC2 724 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDLBP-246ENST00000496569 NUP54Q7Z3B4 507 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 SZRD1Q7Z422 152 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 EXOC3L1Q86VI1 746 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 ULK2Q8IYT8 1036 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 CNPY4Q8N129 248 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 WDSUB1Q8N9V3 476 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 FAM83FQ8NEG4 500 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-246ENST00000496569 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 COL21A1Q96P44 957 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 SECISBP2Q96T21 854 aaKnown RBP11.14□□□□□ -0.63
HDLBP-246ENST00000496569 CCT7Q99832 543 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TRMOQ9BU70 441 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TMEM109Q9BVC6 243 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 RTN4RQ9BZR6 473 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 TRIM8Q9BZR9 551 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 ACKR4Q9NPB9 350 aa11.14□□□□□ -0.63
HDLBP-246ENST00000496569 DDX18Q9NVP1 670 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms