RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, human

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR3-208	ENST00000496050	HAND2	P61296	217 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	OSTN	P61366	133 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	TRA2B	P62995	288 aa	Known RBP	4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	TRIP10	Q15642	601 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	CCL14	Q16627	93 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	PCK2	Q16822	640 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	TMEM41B	Q5BJD5	291 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	ZNF506	Q5JVG8	444 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	NIPAL3	Q6P499	406 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	GSG1L	Q6UXU4	331 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	ERAS	Q7Z444	233 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	NFAM1	Q8NET5	270 aa	Predicted RBP	4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	RASL10A	Q92737	203 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	ART4	Q93070	314 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	TTYH2	Q9BSA4	534 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	TBCD	Q9BTW9	1192 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	MRPL13	Q9BYD1	178 aa	Known RBP	4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	WDR76	Q9H967	626 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	ADGRL4	Q9HBW9	690 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	CENPM	Q9NSP4	180 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	RAI14	Q9P0K7	980 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	MLX	Q9UH92	298 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050	LAMP5	Q9UJQ1	280 aa		4.38	□□□□□ -1.71
SSR3-208	ENST00000496050		A0A1B0GTH9	108 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	MFSD2B	A6NFX1	497 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	FBLL1	A6NHQ2	334 aa	Known RBP	4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	SDC3	O75056	442 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	TSPY4	P0CV99	314 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	TSPY10	P0CW01	314 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	HSPA5	P11021	654 aa	Known RBP	4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	KRT13	P13646	458 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	ARHGDIA	P52565	204 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	METAP1	P53582	386 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	FCN2	Q15485	313 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	ACER2	Q5QJU3	275 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	FAM219B	Q5XKK7	198 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	RFWD3	Q6PCD5	774 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	ZNF841	Q6ZN19	808 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	LHFPL4	Q7Z7J7	247 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	EFCAB13	Q8IY85	973 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	OR10T2	Q8NGX3	314 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	TADA1	Q96BN2	335 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	WBP1	Q96G27	269 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	HPDL	Q96IR7	371 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	VPS35	Q96QK1	796 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	ADNP	Q9H2P0	1102 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	AMBN	Q9NP70	447 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	FARSB	Q9NSD9	589 aa	Known RBP	4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	CCDC7	Q96M83	1385 aa		4.37	□□□□□ -1.71
SSR3-208	ENST00000496050	TRBV7-9	A0A0J9YWB2	115 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	TRABD2B	A6NFA1	517 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	E2F3	O00716	465 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	ANGPT2	O15123	496 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	LANCL1	O43813	399 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	GALR3	O60755	368 aa	Predicted RBP	4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	IGHV3-13	P01766	116 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	STK19	P49842	368 aa	Predicted RBP	4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	EMD	P50402	254 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	HSD17B7	P56937	341 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	ZNF85	Q03923	595 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	OVGP1	Q12889	678 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	CDKN3	Q16667	212 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	TPD52L1	Q16890	204 aa	Predicted RBP	4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	C14orf28	Q4W4Y0	310 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	CYBRD1	Q53TN4	286 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	BTNL3	Q6UXE8	466 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	GPRIN3	Q6ZVF9	776 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	ERICH1	Q86X53	443 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	KRTAP7-1	Q8IUC3	87 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050		Q8N377	158 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	ARL6IP6	Q8N6S5	226 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	ZNF491	Q8N8L2	437 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	STKLD1	Q8NE28	680 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	THRSP	Q92748	146 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	GFRA4	Q9GZZ7	299 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	PALMD	Q9NP74	551 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	C1orf123	Q9NWV4	160 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	CGN	Q9P2M7	1197 aa	Known RBP	4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	RNF24	Q9Y225	148 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	RNF6	Q9Y252	685 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	EIF3L	Q9Y262	564 aa	Known RBP	4.36	□□□□□ -1.71
SSR3-208	ENST00000496050	AP4B1	Q9Y6B7	739 aa		4.36	□□□□□ -1.71
SSR3-208	ENST00000496050		A0A1W2PPR1	153 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	CASK	O14936	926 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	ANP32D	O95626	131 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	SERPINB2	P05120	415 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	SOX6	P35712	828 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	RPL34	P49207	117 aa	Known RBP	4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	NUCB2	P80303	420 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	CYLC2	Q14093	348 aa	Predicted RBP	4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	ABRAXAS2	Q15018	415 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	RAB35	Q15286	201 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	SNAI3	Q3KNW1	292 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	GALNT17	Q6IS24	598 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	SLC39A4	Q6P5W5	647 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	TIPARP	Q7Z3E1	657 aa	Known RBP	4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	CEACAM19	Q7Z692	300 aa		4.35	□□□□□ -1.71
SSR3-208	ENST00000496050	FADS6	Q8N9I5	356 aa		4.35	□□□□□ -1.71

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