RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ABCB7O75027 752 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 HOXB4P17483 251 aaPredicted RBP20.05■□□□□ 0.8
HDDC3-203ENST00000494993 SRD5A2P31213 254 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 CSTF3Q12996 717 aaKnown RBP20.05■□□□□ 0.8
HDDC3-203ENST00000494993 DEFB113Q30KQ7 82 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 PLXDC2Q6UX71 529 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 LUZP2Q86TE4 346 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 CCDC116Q8IYX3 515 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 CDYL2Q8N8U2 506 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 WNT2BQ93097 391 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 FMO2Q99518 471 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 G6PC3Q9BUM1 346 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 ANKRA2Q9H9E1 313 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 GALNT8Q9NY28 637 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 TAS2R10Q9NYW0 307 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 CLCF1Q9UBD9 225 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 DLGAP4Q9Y2H0 992 aa20.05■□□□□ 0.8
HDDC3-203ENST00000494993 KRT6AP02538 564 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 KRT6BP04259 564 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 IL3P08700 152 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 FOSL1P15407 271 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 CPA2P48052 419 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 KRT6CP48668 564 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 STARP49675 285 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 LHX2P50458 406 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 RASA2Q15283 850 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 SCIMPQ6UWF3 145 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 KAT2AQ92830 837 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 INTS12Q96CB8 462 aaKnown RBP20.04■□□□□ 0.8
HDDC3-203ENST00000494993 ERP27Q96DN0 273 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 DTNBP1Q96EV8 351 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 DACH2Q96NX9 599 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 ADOQ96SZ5 270 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 ACBD3Q9H3P7 528 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 DMGDHQ9UI17 866 aaKnown RBP20.04■□□□□ 0.8
HDDC3-203ENST00000494993 FBXL2Q9UKC9 423 aa20.04■□□□□ 0.8
HDDC3-203ENST00000494993 PCDH7O60245 1069 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 TSPAN2O60636 221 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 SUPT7LO94864 414 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 HRGP04196 525 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CT45A8P0DMV1 189 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CT45A9P0DMV2 189 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 DRD2P14416 443 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CHN1P15882 459 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CHMP24386 653 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CORO7P57737 925 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 EFR3AQ14156 821 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 ERCC6LQ2NKX8 1250 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 UNC50Q53HI1 259 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 CT45A2Q5DJT8 189 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF678Q5SXM1 525 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 TEX35Q5T0J7 233 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 AAGABQ6PD74 315 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 SAMD14Q8IZD0 417 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 GCNT2Q8N0V5 402 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 OR9A2Q8NGT5 310 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 UHMK1Q8TAS1 419 aaKnown RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 EXOSC8Q96B26 276 aaKnown RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 VSTM2LQ96N03 204 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 SFXN2Q96NB2 322 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 PIGMQ9H3S5 423 aa20.03■□□□□ 0.8
HDDC3-203ENST00000494993 GSX1Q9H4S2 264 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 RPH3AQ9Y2J0 694 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 MRPS18CQ9Y3D5 142 aaKnown RBP20.03■□□□□ 0.8
HDDC3-203ENST00000494993 SH3D21A4FU49 640 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 PLOD2O00469 737 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 NME6O75414 186 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-203ENST00000494993 SNRPAP09012 282 aaKnown RBP20.02■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF708P17019 499 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 TAC1P20366 129 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 KRT20P35900 424 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 CLDN18P56856 261 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 PSPHP78330 225 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 RAE1P78406 368 aaKnown RBP20.02■□□□□ 0.8
HDDC3-203ENST00000494993 GAB1Q13480 694 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 POU4F3Q15319 338 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 NPSR1Q6W5P4 371 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 LARP4Q71RC2 724 aaKnown RBP eCLIP20.02■□□□□ 0.8
HDDC3-203ENST00000494993 GBP7Q8N8V2 638 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-203ENST00000494993 RNF138Q8WVD3 245 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 IFT81Q8WYA0 676 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 ZNF382Q96SR6 550 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 ACPTQ9BZG2 426 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 DKKL1Q9UK85 242 aa20.02■□□□□ 0.8
HDDC3-203ENST00000494993 A0A087WUV0 522 aaPredicted RBP20.01■□□□□ 0.79
HDDC3-203ENST00000494993 GNG14A0A1W2PPG7 69 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 HCRTR2O43614 444 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 ULK1O75385 1050 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 GRK2P25098 689 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 IL12BP29460 328 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 ECHS1P30084 290 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 HMOX2P30519 316 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 PNLIPRP2P54317 469 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 DIO3P55073 304 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 EEF1A1P68104 462 aaKnown RBP20.01■□□□□ 0.79
HDDC3-203ENST00000494993 SPIN4Q56A73 249 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 EEF1A1P5Q5VTE0 462 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 OR5M10Q6IEU7 315 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 GPRIN3Q6ZVF9 776 aa20.01■□□□□ 0.79
HDDC3-203ENST00000494993 GRAMD2AQ8IUY3 354 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms