RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ADAM10O14672 748 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 COQ9O75208 318 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 REM1O75628 298 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 PRPS1L1P21108 318 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 PTGS2P35354 604 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 CLDN8P56748 225 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 C21orf58P58505 322 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 OCRLQ01968 901 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 HSPB3Q12988 150 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 CPTPQ5TA50 214 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 TRILQ7L0X0 811 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 WDR53Q7Z5U6 358 aaPredicted RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 RNF138Q8WVD3 245 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 ZNF75CPQ92670 426 aaPredicted RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 HOXB13Q92826 284 aaPredicted RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 SLC35A4Q96G79 324 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 ATP6V1G3Q96LB4 118 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 COL21A1Q96P44 957 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 GNRHR2Q96P88 292 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 ADOQ96SZ5 270 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 LMF2Q9BU23 707 aaKnown RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 SIRT3Q9NTG7 399 aaPredicted RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 DDX18Q9NVP1 670 aaKnown RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
SCAP-213ENST00000494938 LIPGQ9Y5X9 500 aa13.16□□□□□ -0.3
SCAP-213ENST00000494938 SVILO95425 2214 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 SDHDO14521 159 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 ZG16O60844 167 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 ICOSLGO75144 302 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 CLDN1O95832 211 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 GPC1P35052 558 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 HPCAL1P37235 193 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 RPL3P39023 403 aaKnown RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 RPP38P78345 283 aaKnown RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 EMC4Q5J8M3 183 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 TMEM198Q66K66 360 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 ARHGAP11AQ6P4F7 1023 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 ZFP28Q8NHY6 868 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 FAM57AQ8TBR7 257 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 TMEM41AQ96HV5 264 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 JSRP1Q96MG2 331 aaPredicted RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 ZNF703Q9H7S9 590 aaPredicted RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 ACKR4Q9NPB9 350 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
SCAP-213ENST00000494938 SH3BGRL2Q9UJC5 107 aa13.15□□□□□ -0.3
SCAP-213ENST00000494938 A0A1W2PRB8 838 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 GXYLT2A0PJZ3 443 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 KLF11O14901 512 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 ANKRD28O15084 1053 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 HDAC3O15379 428 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 SUSD5O60279 629 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 SASH3O75995 380 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 ABOP16442 354 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 LBPP18428 481 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 GABRA3P34903 492 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PRKAG1P54619 331 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 GAS1P54826 345 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 CASP6P55212 293 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PER3P56645 1201 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 WNT3P56703 355 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PSPHP78330 225 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 SNTA1Q13424 505 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 EXOSC6Q5RKV6 272 aaKnown RBP13.14□□□□□ -0.31
SCAP-213ENST00000494938 TIGD3Q6B0B8 471 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 SLC30A6Q6NXT4 461 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 LRRC34Q8IZ02 419 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 WDSUB1Q8N9V3 476 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 NUP43Q8NFH3 380 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 CEP70Q8NHQ1 597 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PSMA8Q8TAA3 256 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 TMCO6Q96DC7 493 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 C16orf58Q96GQ5 468 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 CCDC120Q96HB5 630 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 PRPF18Q99633 342 aaKnown RBP13.14□□□□□ -0.31
SCAP-213ENST00000494938 UBQLN3Q9H347 655 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 ARGLU1Q9NWB6 273 aaPredicted RBP13.14□□□□□ -0.31
SCAP-213ENST00000494938 QPCTLQ9NXS2 382 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 MEMO1Q9Y316 297 aa13.14□□□□□ -0.31
SCAP-213ENST00000494938 SPTAN1Q13813 2472 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms