RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DNAJC27Q9NZQ0 273 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TRPC4Q9UBN4 977 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 KLHL21Q9UJP4 597 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ZNF232Q9UNY5 417 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SH2B3Q9UQQ2 575 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TMEM5Q9Y2B1 443 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ZNF780BQ9Y6R6 833 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 MYOFQ9NZM1 2061 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TBC1D3KA0A087X1G2 549 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 KRT87PA6NCN2 255 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 TBC1D3BA6NDS4 549 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 TBC1D3FA6NER0 549 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 OR1F1O43749 312 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 TLX2O43763 284 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 TMCC2O75069 709 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 SNAPC5O75971 98 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 C1QCP02747 245 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GSTT2P0CG29 244 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GSTT2BP0CG30 244 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 OR12D1P0DN82 309 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 COL9A1P20849 921 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 HIST1H1TP22492 207 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 CPN2P22792 545 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 CMPK1P30085 196 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 PKLRP30613 574 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 BUD31P41223 144 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 CSNK1G2P78368 415 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GAS6Q14393 721 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 ZIC1Q15915 447 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GLYR1Q49A26 553 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 NXNL2Q5VZ03 156 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 TBC1D3GQ6DHY5 549 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 CDC73Q6P1J9 531 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GPALPP1Q8IXQ4 340 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 RDH10Q8IZV5 341 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 ANKRD53Q8N9V6 530 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 FAM83FQ8NEG4 500 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 XAGE5Q8WWM1 108 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 ASB15Q8WXK1 588 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 MRPL48Q96GC5 212 aaKnown RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 DIRAS2Q96HU8 199 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 FRMD6Q96NE9 622 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 F2RL3Q96RI0 385 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 LINC00597Q9H2U6 94 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 GLIPR2Q9H4G4 154 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 SNTG1Q9NSN8 517 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 FBXL12Q9NXK8 326 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 H2AFY2Q9P0M6 372 aaPredicted RBP10.8□□□□□ -0.68
RFC4-214ENST00000494047 NTMQ9P121 344 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 WNT16Q9UBV4 365 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 COLEC10Q9Y6Z7 277 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 ZNF318Q5VUA4 2279 aa10.8□□□□□ -0.68
RFC4-214ENST00000494047 LRIT2A6NDA9 550 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 FAM86C2PA6NEL3 165 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 PRR23AA6NEV1 266 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 HEPACAM2A8MVW5 462 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 POLR1CO15160 346 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 FMO6PO60774 539 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 CYP7B1O75881 506 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 CDRT1O95170 752 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ASGR2P07307 311 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 THBS1P07996 1170 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 HBQ1P09105 142 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 CCNYL3P0C7X3 344 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 SRFP11831 508 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 TNNI3P19429 210 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 PAICSP22234 425 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 F8A1P23610 371 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 MMP11P24347 488 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 TGFBR1P36897 503 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 MEF2AQ02078 507 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 RGS1Q08116 209 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 HTR4Q13639 388 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ANGPT1Q15389 498 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 RPS26P11Q5JNZ5 115 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 SLC35F1Q5T1Q4 408 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 LIPKQ5VXJ0 399 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 MRM1Q6IN84 353 aaKnown RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 SLC48A1Q6P1K1 146 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ZCCHC12Q6PEW1 402 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 PLET1Q6UQ28 207 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 PAMR1Q6UXH9 720 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 ZNF730Q6ZMV8 503 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 IQCHQ86VS3 1027 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 RANBP3LQ86VV4 465 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 LIX1LQ8IVB5 337 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 CACTIN-AS1Q8N1I8 211 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 SLC44A3Q8N4M1 653 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 FBXL6Q8N531 539 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 OR52L1Q8NGH7 329 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 VANGL1Q8TAA9 524 aaPredicted RBP10.79□□□□□ -0.68
RFC4-214ENST00000494047 GPR151Q8TDV0 419 aa10.79□□□□□ -0.68
RFC4-214ENST00000494047 GAL3ST3Q96A11 431 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms