RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TRIM3O75382 744 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TRAPPC6AO75865 159 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 IGHG3P01860 377 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TPOP07202 933 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CT45A8P0DMV1 189 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CT45A9P0DMV2 189 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ELAVL4P26378 380 aaKnown RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 IL12BP29460 328 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 MC3RP41968 323 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 SMSP52788 366 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PNLIPRP2P54317 469 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PRKAG1P54619 331 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 BST1Q10588 318 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF155Q12901 538 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 HSPB3Q12988 150 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PDE7AQ13946 482 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 MLC1Q15049 377 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PDCD2Q16342 344 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 GXYLT1Q4G148 440 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CT45A2Q5DJT8 189 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CPTPQ5TA50 214 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CES4AQ5XG92 561 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM211Q6ICI0 200 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM81Q6P7N7 255 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 XKRXQ6PP77 449 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 RPTNQ6XPR3 784 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 LARP4Q71RC2 724 aaKnown RBP eCLIP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TRILQ7L0X0 811 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF551Q7Z340 670 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 HDXQ7Z353 690 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 DOLPP1Q86YN1 238 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 OR2L13Q8N349 312 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 OR1J4Q8NGS1 313 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 RAB3IL1Q8TBN0 382 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 MGARPQ8TDB4 240 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 HGDQ93099 445 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 CIDECQ96AQ7 238 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 SARAFQ96BY9 339 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 DTNBP1Q96EV8 351 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 SLC35A4Q96G79 324 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM41AQ96HV5 264 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PPP1R36Q96LQ0 422 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 RILPQ96NA2 401 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 SORT1Q99523 831 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 VKORC1Q9BQB6 163 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 C1orf50Q9BV19 199 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 C20orf27Q9GZN8 174 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TP63Q9H3D4 680 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 MANSC1Q9H8J5 431 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 Q9N2J8 555 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ACKR4Q9NPB9 350 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 PLA2G2EQ9NZK7 142 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 NOP53Q9NZM5 478 aaKnown RBP6.4□□□□□ -1.38
TOP3A-207ENST00000493648 KLRF1Q9NZS2 232 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 GIMAP2Q9UG22 337 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 HAO1Q9UJM8 370 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 TINAGQ9UJW2 476 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 ACAD8Q9UKU7 415 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 MEMO1Q9Y316 297 aa6.4□□□□□ -1.38
TOP3A-207ENST00000493648 HIVEP3Q5T1R4 2406 aa6.4□□□□□ -1.39
TOP3A-207ENST00000493648 A1L4Q6 167 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 TRPC5OSA6NMA1 111 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NPIPA2E9PIF3 369 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NPIPA3F8WFD2 350 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 SLCO1B7G3V0H7 640 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GNB5O14775 395 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 SCAMP2O15127 329 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ZNHIT1O43257 154 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 EMC8O43402 210 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 TSPAN2O60636 221 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 ICOSLGO75144 302 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 UGT2B11O75310 529 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 NME6O75414 186 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CBR3O75828 277 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 SOX30O94993 753 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 KCNH1O95259 989 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 RFPL3SP0C7P2 107 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 RNF224P0DH78 156 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 LAMP1P11279 417 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 G6PDP11413 515 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 LBPP18428 481 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GDF1P27539 372 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GABRA3P34903 492 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GCKP35557 465 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 FRKP42685 505 aaPredicted RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CLK3P49761 638 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PSMD4P55036 377 aaKnown RBP6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CLDN8P56748 225 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 CORO7P57737 925 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PRR5P85299 388 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PSG6Q00889 435 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 GAB1Q13480 694 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 PTGR1Q14914 329 aa6.39□□□□□ -1.39
TOP3A-207ENST00000493648 TOMM20Q15388 145 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms