RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FOXC2Q99958 501 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 SH3GL2Q99962 352 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 ACPTQ9BZG2 426 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 OR2B2Q9GZK3 357 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 IQCGQ9H095 443 aaKnown RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 CLEC4MQ9H2X3 399 aaPredicted RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 HHATLQ9HCP6 504 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 MID1IP1Q9NPA3 183 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 RASSF1Q9NS23 344 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 TAS2R10Q9NYW0 307 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 TAS2R7Q9NYW3 318 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 HEY2Q9UBP5 337 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 CACNA1CQ13936 2221 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 A0A087WV62 115 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 TTC36A6NLP5 189 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 A6NNC1 897 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 GLRA3O75311 464 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CRCPO75575 148 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 RCBTB2O95199 551 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CT45A8P0DMV1 189 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CT45A9P0DMV2 189 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 MYL2P10916 166 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 PYGBP11216 843 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 EPXP11678 715 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 DDCP20711 480 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 PTGDSP41222 190 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CLK3P49761 638 aaKnown RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF136P52737 540 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 DGKQP52824 942 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 RAE1P78406 368 aaKnown RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF763Q0D2J5 394 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 C2orf80Q0P641 193 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 LTB4RQ15722 352 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CYP27C1Q4G0S4 372 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CT45A2Q5DJT8 189 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CFAP157Q5JU67 520 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 TCHHL1Q5QJ38 904 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 POMZP3Q6PJE2 187 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 LARP4Q71RC2 724 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CHMP1BQ7LBR1 199 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 MMP21Q8N119 569 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CCNYL1Q8N7R7 359 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 EIF1ADQ8N9N8 165 aaKnown RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 WDSUB1Q8N9V3 476 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 RELL2Q8NC24 303 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 NAXEQ8NCW5 288 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 WNT2BQ93097 391 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 C11orf24Q96F05 449 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 RMND5BQ96G75 393 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 APIPQ96GX9 242 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 VSTM2LQ96N03 204 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 SERHLQ9NQF3 203 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 MIEF1Q9NQG6 463 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 RRAGDQ9NQL2 400 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-205ENST00000492851 CRIM1Q9NZV1 1036 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 MAPRE3Q9UPY8 281 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 OR10H1Q9Y4A9 318 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 WIF1Q9Y5W5 379 aa11.34□□□□□ -0.59
COL6A1-205ENST00000492851 HCFC1P51610 2035 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 H0Y3Z8 333 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 TSPAN2O60636 221 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 IFI6P09912 130 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 TMIGD3P0DMS9 266 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-205ENST00000492851 DNASE1P24855 282 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 SOX18P35713 384 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 IST1P53990 364 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 DIO3P55073 304 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 GFRA1P56159 465 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 EEFSECP57772 596 aaKnown RBP11.33□□□□□ -0.6
COL6A1-205ENST00000492851 DNAJB13P59910 316 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 DUSP2Q05923 314 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 BTKQ06187 659 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 ZNHIT3Q15649 155 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-205ENST00000492851 FBXW10Q5XX13 1052 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 FAM180BQ6P0A1 224 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 IKBIPQ70UQ0 350 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 TRIM46Q7Z4K8 759 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 CAMKMTQ7Z624 323 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 RDH11Q8TC12 318 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 KAT2AQ92830 837 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 PIGMQ9H3S5 423 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 FOLH1BQ9HBA9 442 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 C3orf14Q9HBI5 128 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 JKAMPQ9P055 326 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 TIMM22Q9Y584 194 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 ZNF407Q9C0G0 2248 aa11.33□□□□□ -0.6
COL6A1-205ENST00000492851 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 PLOD2O00469 737 aa11.32□□□□□ -0.6
COL6A1-205ENST00000492851 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms