RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 RNF165Q6ZSG1 346 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 CCDC116Q8IYX3 515 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 OR7G2Q8NG99 324 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 FAM76AQ8TAV0 307 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 C16orf78Q8WTQ4 265 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 HOXB13Q92826 284 aaPredicted RBP7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 RNASE6Q93091 150 aaKnown RBP7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 CCDC126Q96EE4 140 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 METTL2AQ96IZ6 378 aaKnown RBP7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 ZFP3Q96NJ6 502 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 COL21A1Q96P44 957 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 FOXC2Q99958 501 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 OSBPL11Q9BXB4 747 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 BRINP2Q9C0B6 783 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 STMN4Q9H169 189 aaPredicted RBP7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 ANKRA2Q9H9E1 313 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 GALNT9Q9HCQ5 603 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 ALKBH4Q9NXW9 302 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 CRIM1Q9NZV1 1036 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 BCAP29Q9UHQ4 241 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 NF1P21359 2839 aa7.62□□□□□ -1.19
SMARCB1-207ENST00000491967 NUP214P35658 2090 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 NAV3Q8IVL0 2385 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CCDC151A5D8V7 595 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PRAMEF25A6NGN4 478 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 A6NNC1 897 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 GNB5O14775 395 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PCDH7O60245 1069 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 RCBTB2O95199 551 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 GOSR1O95249 250 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 IL2RAP01589 272 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PROCP04070 461 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 IL3P08700 152 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PYGBP11216 843 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF708P17019 499 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 KRT15P19012 456 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 BMP5P22003 454 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PRPH2P23942 346 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CHMP24386 653 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 SRD5A2P31213 254 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MPIP34949 423 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 OPRM1P35372 400 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MAP3K8P41279 467 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 KIR2DL3P43628 341 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MASP1P48740 699 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 LHX2P50458 406 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 IST1P53990 364 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FOXA1P55317 472 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 WNT3P56703 355 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CLDN18P56856 261 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CORO7P57737 925 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 B3GALT5-AS1P59052 145 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 SORDQ00796 357 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PSG6Q00889 435 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ACSM2AQ08AH3 577 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PLCXD2Q0VAA5 305 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MYBPHQ13203 477 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 NNATQ16517 81 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 BCL2A1Q16548 175 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CYP27C1Q4G0S4 372 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FLYWCH1Q4VC44 716 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ACSM2BQ68CK6 577 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FAM71E1Q6IPT2 247 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FRMD7Q6ZUT3 714 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 WDR53Q7Z5U6 358 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 YRDCQ86U90 279 aaKnown RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TDRPQ86YL5 185 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PLCZ1Q86YW0 608 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TRIM42Q8IWZ5 723 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 OR2L13Q8N349 312 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CEP112Q8N8E3 955 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FADS6Q8N9I5 356 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 C9orf106Q8NAJ2 232 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 OR9A2Q8NGT5 310 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 KIF18AQ8NI77 898 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 WNT2BQ93097 391 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TMBIM1Q969X1 311 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TMCO6Q96DC7 493 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MBD6Q96DN6 1003 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ZNF764Q96H86 408 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TMUB1Q9BVT8 246 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 METTL7AQ9H8H3 244 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FOLH1BQ9HBA9 442 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TNFRSF12AQ9NP84 129 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 MYNNQ9NPC7 610 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 SERHLQ9NQF3 203 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 DNAJB12Q9NXW2 375 aaKnown RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 PSMC3IPQ9P2W1 217 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 CLCF1Q9UBD9 225 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 ITGB1BP2Q9UKP3 347 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 GRID1Q9ULK0 1009 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 C19orf53Q9UNZ5 99 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 TIMM22Q9Y584 194 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 WIF1Q9Y5W5 379 aa7.61□□□□□ -1.19
SMARCB1-207ENST00000491967 FLNAP21333 2647 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 A0A1W2PPM1 405 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 C2orf72A6NCS6 295 aa7.6□□□□□ -1.19
SMARCB1-207ENST00000491967 GOLGA8RI6L899 631 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms