RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 SPAG7O75391 227 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 TOXO94900 526 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 TACR1P25103 407 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 NTSP30990 170 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 ADH7P40394 386 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 MC3RP41968 323 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 ZFP36L2P47974 494 aaKnown RBP28.64■■■□□ 2.18
LDB1-204ENST00000490751 TFF3Q07654 80 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 EIPR1Q53HC9 387 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 TMCO6Q96DC7 493 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 SLC35A4Q96G79 324 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 EGLN2Q96KS0 407 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 MECRQ9BV79 373 aa28.64■■■□□ 2.18
LDB1-204ENST00000490751 ROPN1BQ9BZX4 212 aaPredicted RBP28.64■■■□□ 2.18
LDB1-204ENST00000490751 ROPN1Q9HAT0 212 aaPredicted RBP28.64■■■□□ 2.18
LDB1-204ENST00000490751 NPDC1Q9NQX5 325 aaPredicted RBP28.64■■■□□ 2.18
LDB1-204ENST00000490751 ABCB7O75027 752 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 COQ9O75208 318 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 SLU7O95391 586 aaKnown RBP28.63■■■□□ 2.17
LDB1-204ENST00000490751 ZNF155Q12901 538 aaPredicted RBP28.63■■■□□ 2.17
LDB1-204ENST00000490751 WIPI1Q5MNZ9 446 aaPredicted RBP28.63■■■□□ 2.17
LDB1-204ENST00000490751 WDR93Q6P2C0 686 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 TMEM107Q6UX40 140 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 Q6ZSR9 355 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 OR2T11Q8NH01 316 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 ADOQ96SZ5 270 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 TIMP4Q99727 224 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 TUBB1Q9H4B7 451 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 GLIPR2Q9H4G4 154 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.63■■■□□ 2.17
LDB1-204ENST00000490751 MAPRE3Q9UPY8 281 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 V9GYY5 206 aaPredicted RBP28.63■■■□□ 2.17
LDB1-204ENST00000490751 MYO9AB2RTY4 2548 aa28.63■■■□□ 2.17
LDB1-204ENST00000490751 A0A087WV62 115 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 TSPAN2O60636 221 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 SLITRK5O94991 958 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 CHEK2O96017 543 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 CHRNGP07510 517 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 NEFHP12036 1026 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 KRT20P35900 424 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 PSPHP78330 225 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 KANK2Q63ZY3 851 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 RNF165Q6ZSG1 346 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 SLC44A2Q8IWA5 706 aaPredicted RBP28.62■■■□□ 2.17
LDB1-204ENST00000490751 TCP10LQ8TDR4 215 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 CAVIN3Q969G5 261 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 TREX2Q9BQ50 279 aaPredicted RBP28.62■■■□□ 2.17
LDB1-204ENST00000490751 SERHLQ9NQF3 203 aa28.62■■■□□ 2.17
LDB1-204ENST00000490751 INTS1Q8N201 2190 aaKnown RBP28.61■■■□□ 2.17
LDB1-204ENST00000490751 FAM47E-STBD1D6RA91 191 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 NPHS1O60500 1241 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 IL12BP29460 328 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 EFR3AQ14156 821 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 RIPPLY2Q5TAB7 128 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 VASNQ6EMK4 673 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 LARP4Q71RC2 724 aaKnown RBP eCLIP28.61■■■□□ 2.174e-6■■□□□ 12.8
LDB1-204ENST00000490751 YRDCQ86U90 279 aaKnown RBP28.61■■■□□ 2.17
LDB1-204ENST00000490751 FAM83FQ8NEG4 500 aaPredicted RBP28.61■■■□□ 2.17
LDB1-204ENST00000490751 AMDHD1Q96NU7 426 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 C19orf53Q9UNZ5 99 aaPredicted RBP28.61■■■□□ 2.17
LDB1-204ENST00000490751 OR10H1Q9Y4A9 318 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 DNAJC15Q9Y5T4 150 aa28.61■■■□□ 2.17
LDB1-204ENST00000490751 TMEM233B4DJY2 109 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 LINC00032P0C843 101 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 IGFBP2P18065 325 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 MSX1P28360 303 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 SSTR2P30874 369 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 ACSF3Q4G176 576 aaPredicted RBP28.6■■■□□ 2.17
LDB1-204ENST00000490751 NHSL2Q5HYW2 709 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 WDSUB1Q8N9V3 476 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 OR4N2Q8NGD1 307 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 GFM2Q969S9 779 aaKnown RBP28.6■■■□□ 2.17
LDB1-204ENST00000490751 FCRL1Q96LA6 429 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 CCT7Q99832 543 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 UGT2B28Q9BY64 529 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 PRDM14Q9GZV8 571 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 DDX18Q9NVP1 670 aaKnown RBP28.6■■■□□ 2.17
LDB1-204ENST00000490751 CSMD1Q96PZ7 3565 aa28.6■■■□□ 2.17
LDB1-204ENST00000490751 AHRRA9YTQ3 701 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 PLOD2O00469 737 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 BMP7P18075 431 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 RPL38P63173 70 aaKnown RBP28.59■■■□□ 2.17
LDB1-204ENST00000490751 PSG6Q00889 435 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 ARL13AQ5H913 290 aaPredicted RBP28.59■■■□□ 2.17
LDB1-204ENST00000490751 SH2D4BQ5SQS7 431 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 ZCCHC23Q6ZST2 131 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 SEM1Q6ZVN7 128 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 LIX1LQ8IVB5 337 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 PM20D2Q8IYS1 436 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 EFHD2Q96C19 240 aaPredicted RBP28.59■■■□□ 2.17
LDB1-204ENST00000490751 C14orf79Q96F83 325 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 CAMK2AQ9UQM7 478 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 WIF1Q9Y5W5 379 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 DCHS2Q6V1P9 2916 aa28.59■■■□□ 2.17
LDB1-204ENST00000490751 UPK1AO00322 258 aa28.58■■■□□ 2.17
LDB1-204ENST00000490751 FGF4P08620 206 aa28.58■■■□□ 2.17
LDB1-204ENST00000490751 CREB1P16220 341 aa28.58■■■□□ 2.17
LDB1-204ENST00000490751 SDC1P18827 310 aa28.58■■■□□ 2.17
LDB1-204ENST00000490751 PNLIPRP2P54317 469 aa28.58■■■□□ 2.17
LDB1-204ENST00000490751 DCST1Q5T197 706 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms