RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 VSTM2LQ96N03 204 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 COL21A1Q96P44 957 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 ADOQ96SZ5 270 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
VTI1A-206ENST00000489142 LRTM1Q9HBL6 345 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 KCNJ16Q9NPI9 418 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 SERHLQ9NQF3 203 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 GIMAP2Q9UG22 337 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 MID2Q9UJV3 735 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 CAMK2AQ9UQM7 478 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 PDZD2O15018 2839 aa12.8□□□□□ -0.36
VTI1A-206ENST00000489142 TACC2O95359 2948 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 SNPHO15079 494 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 TO15178 435 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 AKAP10O43572 662 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 HPNP05981 417 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 NAGAP17050 411 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 NTSP30990 170 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 KRTAP10-9P60411 292 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 NAA20P61599 178 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 RPL38P63173 70 aaKnown RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 KIAA0040Q15053 153 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 GALNTL6Q49A17 601 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 OR5M10Q6IEU7 315 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 SEM1Q6ZVN7 128 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 LARP4Q71RC2 724 aaKnown RBP eCLIP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 RIBC1Q8N443 379 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 TCP10LQ8TDR4 215 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 CIDECQ96AQ7 238 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 TSSK3Q96PN8 268 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 TIMP4Q99727 224 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 ENKD1Q9H0I2 346 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 GLIPR2Q9H4G4 154 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
VTI1A-206ENST00000489142 C1orf109Q9NX04 203 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 MKS1Q9NXB0 559 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 OR10H1Q9Y4A9 318 aa12.79□□□□□ -0.36
VTI1A-206ENST00000489142 H3BQF6 201 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 SLC28A1O00337 649 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 RGS14O43566 566 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 PLOD3O60568 738 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 TSPAN2O60636 221 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 BCAS2O75934 225 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-206ENST00000489142 SLU7O95391 586 aaKnown RBP12.78□□□□□ -0.36
VTI1A-206ENST00000489142 BMP7P18075 431 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 EFNA1P20827 205 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-206ENST00000489142 IL12BP29460 328 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 GSTM5P46439 218 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 HSPB3Q12988 150 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 SNTB1Q13884 538 aaKnown RBP12.78□□□□□ -0.36
VTI1A-206ENST00000489142 ZNF385BQ569K4 471 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 SLC30A6Q6NXT4 461 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 Q6ZSR9 355 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-206ENST00000489142 DDIASQ8IXT1 998 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 WDSUB1Q8N9V3 476 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 TNIP2Q8NFZ5 429 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 TWIST2Q8WVJ9 160 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 LURAP1Q96LR2 239 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 AMDHD1Q96NU7 426 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 SPOCK3Q9BQ16 436 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 UGT2B28Q9BY64 529 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 TAS2R9Q9NYW1 312 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 FBXL2Q9UKC9 423 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 DNAJC15Q9Y5T4 150 aa12.78□□□□□ -0.36
VTI1A-206ENST00000489142 OR6C70A6NIJ9 312 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 B4DXG7 233 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 UPK1AO00322 258 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 PIP5K1BO14986 540 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 SCO2O43819 266 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 GABRA1P14867 456 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 SDC1P18827 310 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 PRPH2P23942 346 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.37
VTI1A-206ENST00000489142 MSX1P28360 303 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 ARRB2P32121 409 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 KRT20P35900 424 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 RFX3P48380 749 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 PSG6Q00889 435 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 ACSF3Q4G176 576 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-206ENST00000489142 RFTN2Q52LD8 501 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-206ENST00000489142 ARL13AQ5H913 290 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-206ENST00000489142 VASNQ6EMK4 673 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 TMEM81Q6P7N7 255 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 PLXDC2Q6UX71 529 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 IKBIPQ70UQ0 350 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 ACBD4Q8NC06 268 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 OR14L1PQ8NHC6 308 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
VTI1A-206ENST00000489142 CAVIN3Q969G5 261 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms