RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SLC35A4Q96G79 324 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 ALPK1Q96QP1 1244 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 FMO2Q99518 471 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 PFDN4Q9NQP4 134 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 TMEM216Q9P0N5 145 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 VPS13CQ709C8 3753 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 NINQ8N4C6 2090 aa13.92□□□□□ -0.18
TRIM50-203ENST00000488217 ESPNB1AK53 854 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 H0Y3Z8 333 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 DLX3O60479 287 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ZIC3O60481 467 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 TSPAN2O60636 221 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 NME6O75414 186 aaPredicted RBP13.91□□□□□ -0.18
TRIM50-203ENST00000488217 SRD5A2P31213 254 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 MPIP34949 423 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 GFRA1P56159 465 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ADAM8P78325 824 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
TRIM50-203ENST00000488217 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
TRIM50-203ENST00000488217 GAB1Q13480 694 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 EFR3AQ14156 821 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 FAM219BQ5XKK7 198 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 OR5M10Q6IEU7 315 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 SCIMPQ6UWF3 145 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ADGRE4PQ86SQ3 457 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 IFNEQ86WN2 208 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 C16orf78Q8WTQ4 265 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 KAT2AQ92830 837 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 INTS12Q96CB8 462 aaKnown RBP13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ZFP3Q96NJ6 502 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 DACH2Q96NX9 599 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 BTBD9Q96Q07 612 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ZNF382Q96SR6 550 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 YIPF4Q9BSR8 244 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 SFXN3Q9BWM7 321 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
TRIM50-203ENST00000488217 PLEKHF2Q9H8W4 249 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 ANKRA2Q9H9E1 313 aa13.91□□□□□ -0.18
TRIM50-203ENST00000488217 GNG14A0A1W2PPG7 69 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 CLCA1A8K7I4 914 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 ZNF500O60304 480 aaPredicted RBP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 RAF1P04049 648 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 IL3P08700 152 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 FOSL1P15407 271 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 CHMP24386 653 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 ECHS1P30084 290 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 KRT20P35900 424 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 LHX2P50458 406 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 PNLIPRP2P54317 469 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 PSPHP78330 225 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 FOXD4Q12950 439 aaPredicted RBP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 KEAP1Q14145 624 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 HEPACAMQ14CZ8 416 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 BCL2A1Q16548 175 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 GLE1Q53GS7 698 aaKnown RBP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 GPRIN3Q6ZVF9 776 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 LARP4Q71RC2 724 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 OR9A2Q8NGT5 310 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 DTNBP1Q96EV8 351 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 APIPQ96GX9 242 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 POM121Q96HA1 1249 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 VSTM2LQ96N03 204 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 PIGMQ9H3S5 423 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 SLC35C2Q9NQQ7 365 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 FBXL2Q9UKC9 423 aa13.9□□□□□ -0.18
TRIM50-203ENST00000488217 NIPBLQ6KC79 2804 aaeCLIP13.9□□□□□ -0.18
TRIM50-203ENST00000488217 EXOC1LA0A1B0GW35 172 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 A8MXE2 369 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PLOD2O00469 737 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 CASKO14936 926 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PCDH7O60245 1069 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PLOD3O60568 738 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 GOSR1O95249 250 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ATE1O95260 518 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ATP5F1P24539 256 aaPredicted RBP13.89□□□□□ -0.19
TRIM50-203ENST00000488217 HMOX2P30519 316 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PRKAA2P54646 552 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 CORO7P57737 925 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 BTKQ06187 659 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ACSM2AQ08AH3 577 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 DEFB113Q30KQ7 82 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 SPIN4Q56A73 249 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ACSM2BQ68CK6 577 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 GALNT18Q6P9A2 607 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PLXDC2Q6UX71 529 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 PAMR1Q6UXH9 720 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 LUZP2Q86TE4 346 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 LCA5Q86VQ0 697 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 MNS1Q8NEH6 495 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 OR4N2Q8NGD1 307 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 KIF18AQ8NI77 898 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 G6PC3Q9BUM1 346 aa13.89□□□□□ -0.19
TRIM50-203ENST00000488217 ACPTQ9BZG2 426 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms