RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TRIM45Q9H8W5 580 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-219ENST00000488186 PCDHGB3Q9Y5G1 929 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 ZNF354AO60765 605 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 SCN2BO60939 215 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 NEURL1O76050 574 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 SOX30O94993 753 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 KCNH1O95259 989 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 PSMG1O95456 288 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 NADKO95544 446 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 PRB1P04280 392 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 GSNP06396 782 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CT45A8P0DMV1 189 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CT45A9P0DMV2 189 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 NAGAP17050 411 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 MATN1P21941 496 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 RFX3P48380 749 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 PSMD4P55036 377 aaKnown RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 DECR1Q16698 335 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CYP27C1Q4G0S4 372 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CT45A2Q5DJT8 189 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 SLC22A10Q63ZE4 541 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 MFSD12Q6NUT3 480 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 WDR53Q7Z5U6 358 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CPSF7Q8N684 471 aaKnown RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 MDS2Q8NDY4 140 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 FBXO30Q8TB52 745 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 TMBIM1Q969X1 311 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 OMA1Q96E52 524 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 SLC35G5Q96KT7 338 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 SLC35A5Q9BS91 424 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 INPP5KQ9BT40 448 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 LMF2Q9BU23 707 aaKnown RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 ACTRT3Q9BYD9 372 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 EPN3Q9H201 632 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 ADAM21Q9UKJ8 722 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 CBLCQ9ULV8 474 aa14.51□□□□□ -0.09
C9orf3-219ENST00000488186 KLF13Q9Y2Y9 288 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 RP1L1Q8IWN7 2480 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-219ENST00000488186 KLRC4-KLRK1H3BQV0 150 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 ANGPT2O15123 496 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 TO15178 435 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 HS6ST1O60243 411 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 PPM1BO75688 479 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 RASAL1O95294 804 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 SNRPB2P08579 225 aaKnown RBP14.5□□□□□ -0.09
C9orf3-219ENST00000488186 TRPC1P48995 793 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 FBXW4P57775 412 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 MRPS22P82650 360 aaKnown RBP14.5□□□□□ -0.09
C9orf3-219ENST00000488186 GAB1Q13480 694 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 RCAN2Q14206 197 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 MAPRE2Q15555 327 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 ZNF791Q3KP31 576 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-219ENST00000488186 GK5Q6ZS86 529 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 NUP54Q7Z3B4 507 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 GALNTL5Q7Z4T8 443 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 FUNDC1Q8IVP5 155 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 CLEC4FQ8N1N0 589 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 COX18Q8N8Q8 333 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 GOLM1Q8NBJ4 401 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 GOT1L1Q8NHS2 421 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-219ENST00000488186 TMCO6Q96DC7 493 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 COL21A1Q96P44 957 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 SACM1LQ9NTJ5 587 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 NDUFAF1Q9Y375 327 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 PCDHGB6Q9Y5F9 930 aa14.5□□□□□ -0.09
C9orf3-219ENST00000488186 PRRC2CQ9Y520 2896 aaKnown RBP14.5□□□□□ -0.09
C9orf3-219ENST00000488186 HELZ2Q9BYK8 2649 aaKnown RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 DUXAA6NLW8 204 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 SNX3O60493 162 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 ABCB7O75027 752 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 KRT75O95678 551 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 ZFP36L2P47974 494 aaKnown RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 ANXA11P50995 505 aaKnown RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 PSG6Q00889 435 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 EFR3AQ14156 821 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 UBAP2LQ14157 1087 aaKnown RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 NTRK2Q16620 822 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 MMEL1Q495T6 779 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 CDC73Q6P1J9 531 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 SLC2A7Q6PXP3 512 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 NPSR1Q6W5P4 371 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 DNAJC14Q6Y2X3 702 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 PRICKLE2Q7Z3G6 844 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 MDGA2Q7Z553 956 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 SLC16A11Q8NCK7 471 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 PSD4Q8NDX1 1056 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 OR10G3Q8NGC4 313 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 OR4N2Q8NGD1 307 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 PIK3R3Q92569 461 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 DIO2Q92813 273 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 GIMAP5Q96F15 307 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 RMND5BQ96G75 393 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-219ENST00000488186 SCMH1Q96GD3 660 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 ADOQ96SZ5 270 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 STACQ99469 402 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 HES7Q9BYE0 225 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 ZNF385DQ9H6B1 395 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 SAR1AQ9NR31 198 aa14.49□□□□□ -0.09
C9orf3-219ENST00000488186 CNIH4Q9P003 139 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms