RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 H2AFZP0C0S5 128 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 SERPINB6P35237 376 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 SCN1BQ07699 218 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 PTK6Q13882 451 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 ELAVL3Q14576 367 aaKnown RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 SMC1AQ14683 1233 aaKnown RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 EXOSC7Q15024 291 aaKnown RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 ZNF57Q68EA5 555 aaPredicted RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 FRA10AC1Q70Z53 315 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 ASRGL1Q7L266 308 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 SIAH3Q8IW03 269 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 CCDC83Q8IWF9 413 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 OR7G3Q8NG95 312 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 DCUN1D4Q92564 292 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 CNPY3Q9BT09 278 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 RSPO3Q9BXY4 272 aaPredicted RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 GANQ9H2C0 597 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 VCXQ9H320 206 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 EXOSC3Q9NQT5 275 aaKnown RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 GIMAP2Q9UG22 337 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 CDH7Q9ULB5 785 aa2.2□□□□□ -2.06
SMC4-219ENST00000487747 BARX2Q9UMQ3 279 aaPredicted RBP2.2□□□□□ -2.06
SMC4-219ENST00000487747 ASTN1O14525 1302 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 TRBV6-6A0A0A6YYG2 114 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 SUPT7LO94864 414 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 GAS8O95995 478 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 SEMG1P04279 462 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 ZNF823P16415 610 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 GEMP55040 296 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 HERV-K104P63124 156 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 EGFEM1PQ0D2K5 195 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 CD164L2Q6UWJ8 174 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 TUSC5Q8IXB3 177 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 MYDGFQ969H8 173 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 NRTNQ99748 197 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 PPIAL4AQ9Y536 164 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 COL1A2P08123 1366 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 PARD3Q8TEW0 1356 aa2.19□□□□□ -2.06
SMC4-219ENST00000487747 A0A0A6YYC8 382 aaPredicted RBP2.18□□□□□ -2.06
SMC4-219ENST00000487747 I3L1I5 382 aaPredicted RBP2.18□□□□□ -2.06
SMC4-219ENST00000487747 PDLIM1O00151 329 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 GMNNO75496 209 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 LYPLA1O75608 230 aaPredicted RBP2.18□□□□□ -2.06
SMC4-219ENST00000487747 STIP1P31948 543 aaKnown RBP2.18□□□□□ -2.06
SMC4-219ENST00000487747 CTRLP40313 264 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 ACADSBP45954 432 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 PAX5Q02548 391 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 GK2Q14410 553 aaPredicted RBP2.18□□□□□ -2.06
SMC4-219ENST00000487747 RALBP1Q15311 655 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 CCDC158Q5M9N0 1113 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 SULT1C3Q6IMI6 304 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 PET117Q6UWS5 81 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 ZFP2Q6ZN57 461 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 PCGF5Q86SE9 256 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 STHQ8IWL8 128 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 CSNK1A1LQ8N752 337 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 ATAD1Q8NBU5 361 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 NEIL3Q8TAT5 605 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 RPGRIP1Q96KN7 1286 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 ACCSQ96QU6 501 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 APOOQ9BUR5 198 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 DNAJB9Q9UBS3 223 aa2.18□□□□□ -2.06
SMC4-219ENST00000487747 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 A0A0J9YVX5 310 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 WDR46O15213 610 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 SDC3O75056 442 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 RPL32P62910 135 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 C16orf72Q14CZ0 275 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 ZKSCAN8Q15776 578 aaPredicted RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 CAMK4Q16566 473 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 SHROOM1Q2M3G4 852 aaPredicted RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 MSANTD1Q6ZTZ1 278 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 FAM47EQ6ZV65 393 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 TSEN54Q7Z6J9 526 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 SIDT2Q8NBJ9 832 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 DDX50Q9BQ39 737 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 MLPHQ9BV36 600 aaPredicted RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 THUMPD3Q9BV44 507 aaKnown RBP2.17□□□□□ -2.06
SMC4-219ENST00000487747 AP1M1Q9BXS5 423 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 MARCH5Q9NX47 278 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 ONECUT1Q9UBC0 465 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 SLIT3O75094 1523 aa2.17□□□□□ -2.06
SMC4-219ENST00000487747 DLGAP1O14490 977 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 CRCPO75575 148 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 SDC1P18827 310 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 CD1BP29016 333 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 NF2P35240 595 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 NUP107P57740 925 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 NPRL3Q12980 569 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 MOBPQ13875 183 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 MEDAGQ5VYS4 303 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 KCTD11Q693B1 232 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 PYROXD2Q8N2H3 581 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 C20orf203Q8NBC4 194 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 ARNTL2Q8WYA1 636 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 NEIL2Q969S2 332 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 HAVCR1Q96D42 359 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 CCDC114Q96M63 670 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 NAPBQ9H115 298 aa2.16□□□□□ -2.06
SMC4-219ENST00000487747 DNAJC17Q9NVM6 304 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms