RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NDOR1Q9UHB4 597 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 IFT52Q9Y366 437 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 SH3D21A4FU49 640 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 LILRA5A6NI73 299 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 PLOD3O60568 738 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 ZIC2O95409 532 aaPredicted RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 CDK1P06493 297 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 POU1F1P28069 291 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 CNR2P34972 360 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 SOX18P35713 384 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 ALDH6A1Q02252 535 aaKnown RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 COX10Q12887 443 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 TBCEQ15813 527 aaPredicted RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 DEFB110Q30KQ9 67 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 TMEM236Q5W0B7 351 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 CD300LDQ6UXZ3 194 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 NLGN4XQ8N0W4 816 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 ARHGEF39Q8N4T4 335 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 OR52P1PQ8NH57 321 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 GGHQ92820 318 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 POLR2J3Q9H1A7 115 aaKnown RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 STARD5Q9NSY2 213 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 CLCA2Q9UQC9 943 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 HEMK1Q9Y5R4 338 aaPredicted RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 SGK494L7N484 410 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 HCRTR1O43613 425 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 GABARAPO95166 117 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 ACP2P11117 423 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 NT5EP21589 574 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 PSMB9P28065 219 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 TAS2R41P59536 307 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 DUSP5Q16690 384 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 INAVAQ3KP66 663 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 TRMT12Q53H54 448 aaKnown RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 EXOSC6Q5RKV6 272 aaKnown RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 UBE2UQ5VVX9 321 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 SLX4IPQ5VYV7 408 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 ZCCHC12Q6PEW1 402 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 PTCHD4Q6ZW05 846 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 MCATQ8IVS2 390 aaKnown RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 MORN4Q8NDC4 146 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 OR4K5Q8NGD3 323 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 PIGUQ9H490 435 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 MTHFD2LQ9H903 347 aaPredicted RBP19.03■□□□□ 0.64
HPS3-206ENST00000486530 WDR45Q9Y484 360 aa19.03■□□□□ 0.64
HPS3-206ENST00000486530 SLC9B1P1A6NJY1 282 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 MAN1A2O60476 641 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 FCMRO60667 390 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 RDH16O75452 317 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 PROS1P07225 676 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 MAOBP27338 520 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 IFNA8P32881 189 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 NUDT6P53370 316 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 SKP1P63208 163 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 TYW3Q6IPR3 259 aaKnown RBP19.02■□□□□ 0.64
HPS3-206ENST00000486530 PEX5LQ8IYB4 626 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 CDRT4Q8N9R6 151 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 SLC38A4Q969I6 547 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 ZG16BQ96DA0 208 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 YIPF6Q96EC8 236 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 TCTN2Q96GX1 697 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 SH3GL3Q99963 347 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 ANKRD19PQ9H560 264 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 ADAP2Q9NPF8 381 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 CLN6Q9NWW5 311 aa19.02■□□□□ 0.64
HPS3-206ENST00000486530 ZNF443Q9Y2A4 671 aaPredicted RBP19.02■□□□□ 0.64
HPS3-206ENST00000486530 TP53BP1Q12888 1972 aaPredicted RBP19.02■□□□□ 0.63
HPS3-206ENST00000486530 THADAQ6YHU6 1953 aa19.02■□□□□ 0.63
HPS3-206ENST00000486530 H3BN98 237 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 M0R129 80 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SRPX2O60687 465 aaPredicted RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 TPST2O60704 377 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SOX14O95416 240 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 BCL10O95999 233 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 DCNP07585 359 aaKnown RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 ALOX5P09917 674 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 RPL6Q02878 288 aaKnown RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 PRICKLE4Q2TBC4 344 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 PRTGQ2VWP7 1150 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 C12orf73Q69YU5 71 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 C1orf94Q6P1W5 598 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SIMC1Q8NDZ2 872 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 STACQ99469 402 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SLC38A3Q99624 504 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 DUSP22Q9NRW4 184 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 MAT2BQ9NZL9 334 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 MKLN1Q9UL63 735 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SATB2Q9UPW6 733 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SIT1Q9Y3P8 196 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 CHST2Q9Y4C5 530 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 KNL1Q8NG31 2342 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 K7ESF4 209 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 ZNF182P17025 639 aaPredicted RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 MMP11P24347 488 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 SNRPGP62308 76 aaKnown RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 LARS2Q15031 903 aaKnown RBP19.01■□□□□ 0.63
HPS3-206ENST00000486530 CTF1Q16619 201 aa19.01■□□□□ 0.63
HPS3-206ENST00000486530 NIPAL1Q6NVV3 410 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms