RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 C19orf12Q9NSK7 152 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ACSS1Q9NUB1 689 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SAMD4AQ9UPU9 718 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SHROOM3Q8TF72 1996 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 OR2M5A3KFT3 312 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 CASKO14936 926 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 UGDHO60701 494 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 AQP8O94778 261 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PAX6P26367 422 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RAG2P55895 527 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 HTRA4P83105 476 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM31Q5JXX7 168 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RASGEF1AQ8N9B8 481 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 C2CD4AQ8NCU7 369 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RPLP0P6Q8NHW5 317 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 BSCL2Q96G97 398 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ASB16Q96NS5 453 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 OCSTAMPQ9BR26 566 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 INPP5KQ9BT40 448 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PIGMQ9H3S5 423 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 MGAT4CQ9UBM8 478 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF225Q9UK10 706 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 FNDC1Q4ZHG4 1894 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NCF1BA6NI72 391 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NCF1CA8MVU1 366 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 STK25O00506 426 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 MID1O15344 667 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 MED7O43513 233 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PIP5K1CO60331 668 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 LILRB3O75022 631 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PIPP12273 146 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PEPDP12955 493 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ABOP16442 354 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ITGB5P18084 799 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 LAG3P18627 525 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RCC1P18754 421 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PTPN3P26045 913 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PTPN6P29350 595 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SFNP31947 248 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 LSM6P62312 80 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NAE1Q13564 534 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SLC35D3Q5M8T2 416 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 KIAA1211LQ6NV74 962 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NHLRC1Q6VVB1 395 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 Q6ZSR9 355 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 GPR65Q8IYL9 337 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PRSS35Q8N3Z0 413 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 OR5T3Q8NGG3 340 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 HIST1H2BAQ96A08 127 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 FAM120BQ96EK7 910 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 C1GALT1C1Q96EU7 318 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ZBED3Q96IU2 234 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 LCORQ96JN0 433 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 TAAR1Q96RJ0 339 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NIPSNAP1Q9BPW8 284 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SLC38A1Q9H2H9 487 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF629Q9UEG4 869 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 SNX11Q9Y5W9 270 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 NUP205Q92621 2012 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 COL4A5P29400 1685 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 KDM4EB2RXH2 506 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 AP4M1O00189 453 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 PSMD3O43242 534 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 NPM3O75607 178 aaKnown RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 HIST1H2ABP04908 130 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 GIPP09681 153 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF35P13682 527 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 MTHFD2P13995 350 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SHC1P29353 583 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 NOS2P35228 1153 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 LHX1P48742 406 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ADPRHP54922 357 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SEMG2Q02383 582 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 NHLH2Q02577 135 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 FOXO1Q12778 655 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 LCP2Q13094 533 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SURF2Q15527 256 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF239Q16600 458 aaKnown RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ZRANB3Q5FWF4 1079 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 B3GLCTQ6Y288 498 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SPNS3Q6ZMD2 512 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 HIST3H2AQ7L7L0 130 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF551Q7Z340 670 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 GPR135Q8IZ08 494 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 HIST1H2ACQ93077 130 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 PBX4Q9BYU1 374 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 TSPAN10Q9H1Z9 355 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 NCOR1P1Q9H4R4 102 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 GBA2Q9HCG7 927 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM45AQ9NWC5 275 aa7.38□□□□□ -1.23
COL4A5-205ENST00000483338 TEX10Q9NXF1 929 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-205ENST00000483338 NKIRAS2Q9NYR9 191 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms