RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 WNT2BQ93097 391 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 EFHD2Q96C19 240 aaPredicted RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 CTHRC1Q96CG8 243 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 ZNF681Q96N22 645 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 COL21A1Q96P44 957 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 UBTD1Q9HAC8 227 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 BEX4Q9NWD9 120 aaPredicted RBP12.6□□□□□ -0.39
VARS-226ENST00000483275 PSD3Q9NYI0 1048 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 NINJ2Q9NZG7 142 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 FETUBQ9UGM5 382 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 ADAM29Q9UKF5 820 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 PACSIN3Q9UKS6 424 aa12.6□□□□□ -0.39
VARS-226ENST00000483275 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 H7C1Q1 480 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ACOX3O15254 700 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 SCO2O43819 266 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 CBR3O75828 277 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ESRRBO95718 433 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 NAGAP17050 411 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 GRK2P25098 689 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 PCSK6P29122 969 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 CAV1Q03135 178 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ZNF628Q5EBL2 1059 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 TMEM81Q6P7N7 255 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ENPP6Q6UWR7 440 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ZNF550Q7Z398 422 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 PLCZ1Q86YW0 608 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 OR5M1Q8NGP8 315 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 SELENOMQ8WWX9 145 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 EXOSC8Q96B26 276 aaKnown RBP12.59□□□□□ -0.39
VARS-226ENST00000483275 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 PIK3IP1Q96FE7 263 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ZC3HAV1LQ96H79 300 aaKnown RBP12.59□□□□□ -0.39
VARS-226ENST00000483275 WFIKKN1Q96NZ8 548 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 FAM111AQ96PZ2 611 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 NTMT1Q9BV86 223 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 AHSPQ9NZD4 102 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 ZNF225Q9UK10 706 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 UTS2RQ9UKP6 389 aa12.59□□□□□ -0.39
VARS-226ENST00000483275 EIF3LQ9Y262 564 aaKnown RBP12.59□□□□□ -0.39
VARS-226ENST00000483275 SONP18583 2426 aaKnown RBP12.59□□□□□ -0.39
VARS-226ENST00000483275 ATRQ13535 2644 aa12.58□□□□□ -0.39
VARS-226ENST00000483275 TRIM64A6NGJ6 449 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 TRIM64BA6NI03 449 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 A8MXE2 369 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 DEFB108AA8MXU0 73 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 COL6A5A8TX70 2615 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 CASKO14936 926 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 ZIC3O60481 467 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 SMIM24O75264 130 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 CDH16O75309 829 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 OR4F21O95013 312 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 HEXAP06865 529 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 IL3P08700 152 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 RPS17P08708 135 aaKnown RBP12.58□□□□□ -0.4
VARS-226ENST00000483275 ZNF708P17019 499 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 DRD5P21918 477 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 PPICP45877 212 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 STX5Q13190 355 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 SNTA1Q13424 505 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 GGTA1PQ4G0N0 100 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 LARP4Q71RC2 724 aaKnown RBP eCLIP12.58□□□□□ -0.4
VARS-226ENST00000483275 TAOK1Q7L7X3 1001 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 P4HA3Q7Z4N8 544 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 CCDC91Q7Z6B0 441 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 CCDC116Q8IYX3 515 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 CDYL2Q8N8U2 506 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 UHMK1Q8TAS1 419 aaKnown RBP12.58□□□□□ -0.4
VARS-226ENST00000483275 ZNF483Q8TF39 744 aaPredicted RBP12.58□□□□□ -0.4
VARS-226ENST00000483275 SMPDL3BQ92485 455 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 ISL2Q96A47 359 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 PERPQ96FX8 193 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 Q96MF0 132 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 ZFP3Q96NJ6 502 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 ZDHHC18Q9NUE0 388 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
VARS-226ENST00000483275 CFL2Q9Y281 166 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 GPR55Q9Y2T6 319 aaPredicted RBP12.58□□□□□ -0.4
VARS-226ENST00000483275 ZNF780BQ9Y6R6 833 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 USF3Q68DE3 2245 aa12.58□□□□□ -0.4
VARS-226ENST00000483275 HIVEP2P31629 2446 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 OR6C70A6NIJ9 312 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 A8MT66 165 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 KIAA1324LA8MWY0 1029 aaPredicted RBP12.57□□□□□ -0.4
VARS-226ENST00000483275 STX16-NPEPL1H3BU86 382 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 STX16O14662 325 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 TO15178 435 aa12.57□□□□□ -0.4
VARS-226ENST00000483275 SEC14L5O43304 696 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms